FFCP PHASE1:Hg19::chr12:3077577..3077583,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:3077577..3077583,+ | |||
|description=CAGE_peak_at_chr12:3077577..3077583,+ | |description=CAGE_peak_at_chr12:3077577..3077583,+ | ||
|id=chr12:3077577..3077583,+ | |id=chr12:3077577..3077583,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.59e-10!254;CL:0000039!1.15e-07!7;CL:0000586!1.15e-07!7 | |ontology_enrichment_celltype=CL:0000066!8.59e-10!254;CL:0000039!1.15e-07!7;CL:0000586!1.15e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.40e-24;7!CL:0000586;9.40e-24;7!CL:0000313;1.07e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-23,7;CL:0000586,1.28e-23,7;CL:0000313,6.97e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.05e-10;10!UBERON:0005564;1.05e-10;10!UBERON:0000358;3.93e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.44e-29!143;DOID:305!9.95e-23!106;DOID:162!1.21e-18!235;DOID:14566!1.68e-18!239;DOID:7!1.79e-07!39 | |ontology_enrichment_disease=DOID:0050687!2.44e-29!143;DOID:305!9.95e-23!106;DOID:162!1.21e-18!235;DOID:14566!1.68e-18!239;DOID:7!1.79e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.64e-14;22!DOID:2994;5.64e-14;22!DOID:1799;3.93e-08;1!DOID:10165;3.93e-08;1!DOID:1798;3.93e-08;1!DOID:2152;1.07e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.72e-14,22;DOID:2994,5.72e-14,22;DOID:0050687,4.13e-11,143;DOID:305,2.94e-09,106;DOID:1799,3.32e-08,1;DOID:10165,3.32e-08,1;DOID:1798,3.32e-08,1;DOID:2152,6.97e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.47e-07!169;UBERON:0000925!4.47e-07!169;UBERON:0006595!4.47e-07!169;UBERON:0001007!8.68e-07!155;UBERON:0001555!8.68e-07!155;UBERON:0007026!8.68e-07!155 | |ontology_enrichment_uberon=UBERON:0004119!4.47e-07!169;UBERON:0000925!4.47e-07!169;UBERON:0006595!4.47e-07!169;UBERON:0001007!8.68e-07!155;UBERON:0001555!8.68e-07!155;UBERON:0007026!8.68e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.17e-08;8!UBERON:0004911;1.07e-07;1!UBERON:0002171;1.07e-07;1!UBERON:0004913;1.07e-07;1!UBERON:0002426;1.07e-07;1!UBERON:0003831;1.07e-07;1!UBERON:0003898;1.07e-07;1!UBERON:0004830;1.07e-07;1!UBERON:0003703;1.07e-07;1!UBERON:0006518;1.07e-07;1!UBERON:0008949;1.07e-07;1!UBERON:0003830;1.07e-07;1!UBERON:0005175;1.07e-07;1!UBERON:0001774;1.07e-07;1!UBERON:0000101;1.07e-07;1!UBERON:0001103;1.07e-07;1!UBERON:0002167;1.07e-07;1!UBERON:0001174;1.07e-07;1!UBERON:0004914;1.07e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.65e-08,8;UBERON:0004911,6.97e-08,1;UBERON:0002426,7.97e-08,1;UBERON:0003831,7.97e-08,1;UBERON:0003898,7.97e-08,1;UBERON:0004830,7.97e-08,1;UBERON:0003830,7.97e-08,1;UBERON:0005175,7.97e-08,1;UBERON:0001774,7.97e-08,1;UBERON:0001103,7.97e-08,1;UBERON:0010084,7.97e-08,1;UBERON:0002171,1.04e-07,1;UBERON:0006518,1.04e-07,1;UBERON:0008949,1.04e-07,1;UBERON:0000101,1.04e-07,1;UBERON:0002167,1.04e-07,1;UBERON:0004913,1.87e-07,1;UBERON:0003703,1.87e-07,1;UBERON:0001174,1.87e-07,1;UBERON:0004914,1.87e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.502170558379211,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.130979075497713,0,0,0,0.348259474598534,0,0,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.788280363383256,0,0,0,0,0,0,0,0,0.264818361626438,0,1.06400514659507,0,0,0,0,0.404132016209064,0,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0.506328996723799,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.348581828608555,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.674338760312407,0,0.330881918197182,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.473107245101804,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0,0.483437798366489,0,0.184161977871793,0,0.182091168006717,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0.307007349452259,0.275673144969061,0,0.435050081742686,0.255679882248303,0.178064071293475,0.165284915360978,0.384380134730212,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,2.45040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0.111443384277478,0.568272293612826,0,0,0,0,0.140669416410513,0.111308705022906,0,4.43363357068786,0.398495976502139,0.276283915531148,0,0,0,0,0.359473404589307,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.962059999958153,0,1.0241410345695,0.254253650292766,0.945550727071745,0.344743373241465,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,2.3056390438806,0.987334088507493,2.93347904189422,0,0,0,0,0.470940769185074,0,0,0,0.335643173951685,0,0,0.843992258112108,0.652931232636591,0.424059214301822,0,1.99052386215701,0,0.611030144933625,0.889563386041866,0,0.208843899010911,0,1.60515529459758,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0.992975867626496,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0.870592065804026,0,0.343972064943233,0.290268993867255,0.730893170861856,0.739039113478883,0.0969890164884194,0.264768380074501,0.225980740780532,0,0.19871461170299,0,0.195551382734803,0.400794101257669,0,0,0.144090417154106,0.343609788497747,0,0.14405479798815,0,0,0.135904206073614,0.418411385249333,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0.837847203816763,0.458320848023367,0.717873024576814,0.399358000997982,0.858452096273142,0.446342914883745,0.201550417460179,0.360299883542404,2.32991899054908,0.945398187686684,0.412079291905832,1.14586024552114,0.0984274815147488,0.254019996197353,0,0.272406812223151,1.60753148465019,0.550157746388935,2.07720169014593,0.2249738915515,0,0,0.670869375198532,0.472834243795189,0.157363764404994,1.05600336519407,0,0.383830394638891,0,0,1.5256112259285,0,0,0,0,0.574647645245373,0.511164065356265,0.566560457600628,0,0,0.129282956361551,0.39669780522807,0.684347351537318,1.40963004463334,0.533937062838473,0,1.24271716604159,0,0,0,0,0,0.5013797880454,0,0,0.314108192500469,0,0.122026264901963,0.3755727921195,0,0.332787154610557,0.18628920882415,0,0.124980407962107,0,0,0,0.936669811613763,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0.643324774124777,0.260994291965212,0,0,0.489473409012935,0.537266523244462,0.308801447160972,0.438568099157414,0.530067437837643,0,0.168942440653073,0,1.0362910251936,0.303859956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| ||
|short_description=p@chr12:3077577..3077583,+ | |short_description=p@chr12:3077577..3077583,+ | ||
}} | }} |
Latest revision as of 08:03, 24 July 2015
Short description: | p@chr12:3077577..3077583, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:3077577..3077583, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.28e-23 | 7 |
germ cell | 1.28e-23 | 7 |
serous secreting cell | 6.97e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 6.65e-08 | 8 |
epithelium of female gonad | 6.97e-08 | 1 |
chest muscle | 7.97e-08 | 1 |
respiratory system muscle | 7.97e-08 | 1 |
skeletal muscle of trunk | 7.97e-08 | 1 |
respiratory system skeletal muscle | 7.97e-08 | 1 |
thoracic segment muscle | 7.97e-08 | 1 |
chest organ | 7.97e-08 | 1 |
muscle of trunk | 7.97e-08 | 1 |
diaphragm | 7.97e-08 | 1 |
future diaphragm | 7.97e-08 | 1 |
lower lobe of right lung | 1.04e-07 | 1 |
right lung lobe | 1.04e-07 | 1 |
lower lobe of lung | 1.04e-07 | 1 |
lobe of lung | 1.04e-07 | 1 |
right lung | 1.04e-07 | 1 |
hepatopancreatic ampulla | 1.87e-07 | 1 |
extrahepatic bile duct | 1.87e-07 | 1 |
common bile duct | 1.87e-07 | 1 |
duodenal papilla | 1.87e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.72e-14 | 22 |
germ cell cancer | 5.72e-14 | 22 |
cell type cancer | 4.13e-11 | 143 |
carcinoma | 2.94e-09 | 106 |
islet cell tumor | 3.32e-08 | 1 |
endocrine pancreas cancer | 3.32e-08 | 1 |
pancreatic endocrine carcinoma | 3.32e-08 | 1 |
ovary epithelial cancer | 6.97e-08 | 1 |