FFCP PHASE1:Hg19::chr12:38532709..38532714,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:38532709..38532714,+ | |||
|description=CAGE_peak_at_chr12:38532709..38532714,+ | |description=CAGE_peak_at_chr12:38532709..38532714,+ | ||
|id=chr12:38532709..38532714,+ | |id=chr12:38532709..38532714,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;4.66e-21;1!CL:0000911;4.66e-21;1!CL:0000814;4.66e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.82e-21,1;CL:0000914,2.82e-21,1;CL:0000911,2.82e-21,1;CL:0000814,2.82e-21,1;CL:0002042,2.82e-21,1;CL:0002039,2.82e-21,1;CL:0002040,2.82e-21,1;CL:0002041,2.82e-21,1;CL:0000893,2.47e-11,2;CL:0002489,2.47e-11,2;CL:0000809,2.47e-11,2;CL:0000808,2.47e-11,2;CL:0000894,2.47e-11,2;CL:0000806,2.47e-11,2;CL:0000807,2.47e-11,2;CL:0000805,2.47e-11,2;CL:0002425,2.47e-11,2 | |||
|ontology_enrichment_development_v019=CL:0002425;3.18e-11;2!UBERON:0010122;3.18e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000002!7.52e-07!6;UBERON:0001560!7.52e-07!6 | |ontology_enrichment_uberon=UBERON:0000002!7.52e-07!6;UBERON:0001560!7.52e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0009663;2.81e-12;7!UBERON:0001873;3.18e-11;2!UBERON:0001875;3.18e-11;2!UBERON:0006514;3.18e-11;2!UBERON:0002420;9.23e-10;9!UBERON:0000125;9.23e-10;9!UBERON:0007245;9.23e-10;9!UBERON:0002308;9.23e-10;9!UBERON:0010009;9.23e-10;9!UBERON:0010011;9.23e-10;9!UBERON:0000454;9.23e-10;9!UBERON:0005383;6.56e-08;3!UBERON:0005382;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,2.98e-12,7;UBERON:0001873,2.73e-11,2;UBERON:0010122,2.73e-11,2;UBERON:0001875,4.09e-11,2;UBERON:0006514,4.09e-11,2;UBERON:0002420,9.65e-10,9;UBERON:0000125,9.65e-10,9;UBERON:0007245,9.65e-10,9;UBERON:0002308,9.65e-10,9;UBERON:0010009,9.65e-10,9;UBERON:0010011,9.65e-10,9;UBERON:0000454,9.65e-10,9;UBERON:0005383,5.93e-08,3;UBERON:0005382,5.93e-08,3 | |||
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| ||
|short_description=p@chr12:38532709..38532714,+ | |short_description=p@chr12:38532709..38532714,+ | ||
}} | }} |
Latest revision as of 08:17, 24 July 2015
Short description: | p@chr12:38532709..38532714, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:38532709..38532714, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.82e-21 | 1 |
immature NK T cell | 2.82e-21 | 1 |
effector T cell | 2.82e-21 | 1 |
mature NK T cell | 2.82e-21 | 1 |
immature NK T cell stage IV | 2.82e-21 | 1 |
immature NK T cell stage I | 2.82e-21 | 1 |
immature NK T cell stage II | 2.82e-21 | 1 |
immature NK T cell stage III | 2.82e-21 | 1 |
thymocyte | 2.47e-11 | 2 |
double negative thymocyte | 2.47e-11 | 2 |
double-positive, alpha-beta thymocyte | 2.47e-11 | 2 |
DN4 thymocyte | 2.47e-11 | 2 |
DN1 thymic pro-T cell | 2.47e-11 | 2 |
DN2 thymocyte | 2.47e-11 | 2 |
DN3 thymocyte | 2.47e-11 | 2 |
immature single positive thymocyte | 2.47e-11 | 2 |
early T lineage precursor | 2.47e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
telencephalic nucleus | 2.98e-12 | 7 |
caudate nucleus | 2.73e-11 | 2 |
future caudate nucleus | 2.73e-11 | 2 |
globus pallidus | 4.09e-11 | 2 |
pallidum | 4.09e-11 | 2 |
basal ganglion | 9.65e-10 | 9 |
neural nucleus | 9.65e-10 | 9 |
nuclear complex of neuraxis | 9.65e-10 | 9 |
nucleus of brain | 9.65e-10 | 9 |
aggregate regional part of brain | 9.65e-10 | 9 |
collection of basal ganglia | 9.65e-10 | 9 |
cerebral subcortex | 9.65e-10 | 9 |
caudate-putamen | 5.93e-08 | 3 |
dorsal striatum | 5.93e-08 | 3 |