FFCP PHASE1:Hg19::chr12:4379146..4379160,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:4379146..4379160,+
|short_description=p@chr12:4379146..4379160,+
|description=CAGE_peak_at_chr12:4379146..4379160,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:4379146..4379160,+ | |||
|description=CAGE_peak_at_chr12:4379146..4379160,+ | |||
|id=chr12:4379146..4379160,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.14e-31!52;CL:0000542!1.45e-30!53;CL:0000051!1.45e-30!53;CL:0000945!9.15e-17!24;CL:0000826!9.15e-17!24;CL:0000236!3.54e-13!14;CL:0000738!7.65e-13!140;CL:0000084!1.88e-12!25;CL:0000827!1.88e-12!25;CL:0000791!2.37e-12!18;CL:0000789!2.37e-12!18;CL:0002420!2.37e-12!18;CL:0002419!2.37e-12!18;CL:0000790!2.37e-12!18;CL:0002087!3.57e-12!119;CL:0000037!4.22e-12!172;CL:0000566!4.22e-12!172;CL:0000988!5.88e-12!182;CL:0002031!2.21e-10!124;CL:0002032!1.03e-09!165;CL:0000837!1.03e-09!165;CL:0000625!2.55e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.79e-29;13!CL:0000945;1.29e-28;24!CL:0000784;1.02e-18;3!CL:0000542;8.94e-16;53!CL:0000785;8.79e-08;1!CL:0000819;8.79e-08;1!CL:0002127;2.27e-07;1!CL:0000911;2.27e-07;1!CL:0000814;2.27e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.08e-29,24;CL:0000826,3.08e-29,24;CL:0000236,2.37e-27,14;CL:0000838,1.81e-23,52;CL:0000542,5.75e-23,53;CL:0000051,5.75e-23,53;CL:0000784,5.77e-19,3;CL:0000738,9.68e-11,136;CL:0002087,3.22e-10,115;CL:0002031,1.16e-09,120;CL:0000037,5.15e-08,168;CL:0000819,9.71e-08,1;CL:0000988,1.99e-07,177;CL:0002127,3.20e-07,1;CL:0000914,3.20e-07,1;CL:0000911,3.20e-07,1;CL:0000814,3.20e-07,1;CL:0002042,3.20e-07,1;CL:0002039,3.20e-07,1;CL:0002040,3.20e-07,1;CL:0002041,3.20e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;8.94e-16;53!UBERON:0001045;2.27e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;8.79e-08;1!DOID:0060073;8.79e-08;1!DOID:0060061;8.79e-08;1!DOID:8675;8.79e-08;1!DOID:8691;8.79e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.10e-08,1;DOID:0060061,9.10e-08,1;DOID:8691,9.10e-08,1;DOID:0060073,9.71e-08,1;DOID:8675,9.71e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.86e-11!15;UBERON:0000179!6.86e-11!15;UBERON:0000463!6.86e-11!15;UBERON:0004177!1.14e-10!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.27e-07;1!UBERON:0001154;2.27e-07;1!UBERON:0001153;2.27e-07;1!UBERON:0009854;2.27e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.95e-07,1;UBERON:0001154,3.40e-07,1;UBERON:0001153,3.40e-07,1;UBERON:0001045,3.40e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,1.23150884174919,1.65292640758726,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,1.77901850772711,0.853460445133014,1.60158394814405,0,1.98313461835459,0.954053754535364,2.27685187643779,1.76171156811282,0,1.32171328579026,0,0.263384084775077,0.983548850569165,0,1.02800749499755,2.34061093546949,0.32592226663359,0,0,0.334231370655521,0,0.886135578334485,0.812411591295047,0.896639238079726,0.650296737799391,0.657751618414705,0,1.15921234294021,0.741432815810302,1.07016331235885,0,0.226618685395132,0.383220493601921,0,0,0.637130828648193,0,0,0.451725357233318,0.76791966692651,0,1.18388626022008,0.821127996921047,0.80642697289893,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,1.43094374583205,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0.365921118388786,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.788123040807709,0.646882724578552,0.77005821767849,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,1.01489521846434,1.52927441428475,1.13929437434833,0.476463550915578,1.64544909234478,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,1.10513566212459,0,0,1.96935688737711,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0.86494757262552,0.313265848516366,0,0,0,2.00700268137233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,1.48849806543585,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,2.19986135440423,0.106691729694141,0.344429959321631,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.463044948647668,1.09279780251979,0,0,0,0,0,0,0,1.03382309777839,0.709036767709349,0.799529247399431,0,0,0,0,0,0,0.473314686579554,0.0679914901909147,0,0,0,0,0,0,0,3.29416102629736,0,0.26721740526556,3.21632148371957,3.76061308938563,0.151557396436479,0,0,0,0.213233981900981,0.23806443146374,0.839655827868079,0.372448285775147,0,0,0,0,0,0.404112318087525,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,1.23150884174919,1.65292640758726,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,1.77901850772711,0.853460445133014,1.60158394814405,0,1.98313461835459,0.954053754535364,2.27685187643779,1.76171156811282,0,1.32171328579026,0,0.263384084775077,0.983548850569165,0,1.02800749499755,2.34061093546949,0.32592226663359,0,0,0.334231370655521,0,0.886135578334485,0.812411591295047,0.896639238079726,0.650296737799391,0.657751618414705,0,1.15921234294021,0.741432815810302,1.07016331235885,0,0.226618685395132,0.383220493601921,0,0,0.637130828648193,0,0,0.451725357233318,0.76791966692651,0,1.18388626022008,0.821127996921047,0.80642697289893,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,1.43094374583205,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0.365921118388786,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.788123040807709,0.646882724578552,0.77005821767849,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,1.01489521846434,1.52927441428475,1.13929437434833,0.476463550915578,1.64544909234478,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,1.10513566212459,0,0,1.96935688737711,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0.86494757262552,0.313265848516366,0,0,0,2.00700268137233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,1.48849806543585,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,2.19986135440423,0.106691729694141,0.344429959321631,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.463044948647668,1.09279780251979,0,0,0,0,0,0,0,1.03382309777839,0.709036767709349,0.799529247399431,0,0,0,0,0,0,0.473314686579554,0.0679914901909147,0,0,0,0,0,0,0,3.29416102629736,0,0.26721740526556,3.21632148371957,3.76061308938563,0.151557396436479,0,0,0,0.213233981900981,0.23806443146374,0.839655827868079,0.372448285775147,0,0,0,0,0,0.404112318087525,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0.641136984606466 | ||
|short_description=p@chr12:4379146..4379160,+ | |||
}} | }} |
Latest revision as of 08:29, 24 July 2015
Short description: | p@chr12:4379146..4379160, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4379146..4379160, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.08e-29 | 24 |
pro-B cell | 3.08e-29 | 24 |
B cell | 2.37e-27 | 14 |
lymphoid lineage restricted progenitor cell | 1.81e-23 | 52 |
lymphocyte | 5.75e-23 | 53 |
common lymphoid progenitor | 5.75e-23 | 53 |
plasmacytoid dendritic cell | 5.77e-19 | 3 |
leukocyte | 9.68e-11 | 136 |
nongranular leukocyte | 3.22e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-09 | 120 |
hematopoietic stem cell | 5.15e-08 | 168 |
B-1 B cell | 9.71e-08 | 1 |
hematopoietic cell | 1.99e-07 | 177 |
innate effector T cell | 3.20e-07 | 1 |
immature NK T cell | 3.20e-07 | 1 |
effector T cell | 3.20e-07 | 1 |
mature NK T cell | 3.20e-07 | 1 |
immature NK T cell stage IV | 3.20e-07 | 1 |
immature NK T cell stage I | 3.20e-07 | 1 |
immature NK T cell stage II | 3.20e-07 | 1 |
immature NK T cell stage III | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.95e-07 | 1 |
vermiform appendix | 3.40e-07 | 1 |
caecum | 3.40e-07 | 1 |
midgut | 3.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.10e-08 | 1 |
cutaneous T cell lymphoma | 9.10e-08 | 1 |
mycosis fungoides | 9.10e-08 | 1 |
lymphatic system cancer | 9.71e-08 | 1 |
lymphosarcoma | 9.71e-08 | 1 |