FFCP PHASE1:Hg19::chr12:50570817..50570830,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:50570817..50570830,- | |||
|description=CAGE_peak_at_chr12:50570817..50570830,- | |description=CAGE_peak_at_chr12:50570817..50570830,- | ||
|id=chr12:50570817..50570830,- | |id=chr12:50570817..50570830,- | ||
|ontology_enrichment_celltype=CL:0000055!2.60e-09!180;CL:0000057!5.11e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.60e-09!180;CL:0000057!5.11e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.31e-10;19!CL:0000135;4.66e-09;3!CL:0000388;4.66e-09;3!CL:0000197;2.95e-08;6!CL:0000098;2.95e-08;6!CL:0002167;2.95e-08;6!CL:0000153;5.38e-08;9!CL:0000447;5.38e-08;9 | |ontology_enrichment_celltype_v019=CL:0000077;2.31e-10;19!CL:0000135;4.66e-09;3!CL:0000388;4.66e-09;3!CL:0000197;2.95e-08;6!CL:0000098;2.95e-08;6!CL:0002167;2.95e-08;6!CL:0000153;5.38e-08;9!CL:0000447;5.38e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.08e-10,19;CL:0000057,2.78e-09,76;CL:0000135,6.15e-09,3;CL:0000388,6.15e-09,3;CL:0000197,4.25e-08,6;CL:0000098,4.25e-08,6;CL:0002167,4.25e-08,6;CL:0000153,9.10e-08,9;CL:0000447,9.10e-08,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.66e-09;3!DOID:127;4.66e-09;3!DOID:0060072;6.98e-07;4 | |ontology_enrichment_disease_v019=DOID:0060084;4.66e-09;3!DOID:127;4.66e-09;3!DOID:0060072;6.98e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.38e-09,3;DOID:127,2.38e-09,3;DOID:0060072,4.26e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.37e-08!95 | |ontology_enrichment_uberon=UBERON:0003102!6.37e-08!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.66e-09;3!UBERON:0000043;4.66e-09;3!UBERON:0007845;4.66e-09;3!UBERON:0004457;1.00e-07;9!UBERON:0000042;1.00e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0007846;4.66e-09;3!UBERON:0000043;4.66e-09;3!UBERON:0007845;4.66e-09;3!UBERON:0004457;1.00e-07;9!UBERON:0000042;1.00e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.15e-09,3;UBERON:0000043,6.15e-09,3;UBERON:0007845,6.15e-09,3 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,2.00146596706261,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0.37129905888014,0,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0.286235987131057,0.684372125364421,0.251085279189606,0.305653622991805,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.443067789167242,0,0.25618263945135,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,3.97583067623023,1.00267582127178,2.75208386025565,0,0.973269740605272,0.0945348171640679,0,0.263504357079378,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,1.62028389576352,0.0892997282840798,0,0,0,0,0,0,0,0,2.48485975847659,0.633152558322899,1.19168262731897,1.43418310374407,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0.936480230490962,0,0.747243402759005,0,0,0,0,0.122834317311768,0.103325781175765,0,1.7308685049499,0,0,0,0,0,0,1.5324389789951,0,0.680593098960126,3.04962380671065,1.06778694409284,1.69545520927649,0.300091096084402,0.824420233907511,1.28820270022815,0.930584281657949,2.02531598689519,0.584622030967192,0.757301322732344,1.19664868234989,0.323292113637624,1.77504796258307,0.403008392910561,1.01736355386293,1.54608682530637,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,0,0.709840800239063,0.168584690078102,0,0.55146986366197,0.217879444092406,0.237270619111097,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0.514703430895577,0.878002283269004,1.1240175325762,1.80952150340936,0.370353780634118,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0.503946384596579,0.425325291727159,1.43293636324557,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0.308482478109971,1.8020583470635,0.571652865261156,0,0,0.2933531432838,0.129271715757778,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,1.20575750823834,0,3.69900067373611,0,0,2.10833939483032,0.479249710983165,1.14861935834114,0,0.434343920002738,1.2328579353023,0.358121926479791,0,0,0,0,1.01637849688985,0,0,0,0.637938751653163,0,0,0,0.12269149171914,1.00034104211935,0,2.70362119990049,3.21172179834891,3.15404830067869,1.05427273493442,0,0,0,3.32112799267718,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0.604780586659361,0.992431231275107,0.920771839728375,1.12264037773229,0.896974044789907,1.53512174720011,1.44768529029247,0,0.462629081407967,0.177561725313127,0,0.519254429183621,0.116210378459959,0.120859449591622,3.40860999515584,0.736647911487171,0.114814448164607,1.0925470080403,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.193341436584244,0.308097234229289,0,0.137836572484531,0.322260734604821,0,0.255679882248303,0.267096106940212,0.661139661443912,0.384380134730212,1.53135254993501,0.10115778085555,0.464845549297286,0.94443704049192,0,0,0.532306030317022,0,0,0.143124886741991,0.744316738719335,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,1.05650146756755,0.409499734223957,0.707027159768564,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.589494246078727,0,0.354761064070598,1.05553817648832,3.29294892959902,0,0,0.288666338176536,0,0,0,0,1.68471475667626,0,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,1.98895302764489,0.47748896947538,0,0.921482106297696,0,0,0.222617410045812,0.16480387422676,0.211125408127993,0,0.276283915531148,0.503865495708552,0.306806047506464,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0.236387681767936,0,0.291604613383254,0,0,0,0,0.442317039724898,0.886642856860642,0,0,0.278847488557207,0,0.227884111694002,0,0.448788222048861,0.760531603454056,0.31900115973192,0.366390373607449,1.5991043280559,0,0,0.166211681900156,0,0,0.335643173951685,0,0,0.210998064528027,0.489698424477443,0,0,0.995261931078505,0,0,0,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.554698692052555,0.694238953340524,0.293977192243133,0.261177619741208,0,0.51595809741485,0,0,0,0,0,0,0.137041924646751,0,0,0.586654148204409,0.0801588202515337,0,0,0.432271251462318,0,0.343189995723929,0,0,0,0.407712618220842,0,0.305994652908965,0,0,0,0,0.429765441419957,0.262887354279314,0.279282401272254,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0.393709926058995,0.0846733320657845,0,0,0,0.137539436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| ||
|short_description=p@chr12:50570817..50570830,- | |short_description=p@chr12:50570817..50570830,- | ||
}} | }} |
Latest revision as of 09:13, 24 July 2015
Short description: | p@chr12:50570817..50570830, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:50570817..50570830, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.08e-10 | 19 |
fibroblast | 2.78e-09 | 76 |
fibrocyte | 6.15e-09 | 3 |
tendon cell | 6.15e-09 | 3 |
receptor cell | 4.25e-08 | 6 |
sensory epithelial cell | 4.25e-08 | 6 |
olfactory epithelial cell | 4.25e-08 | 6 |
GAG secreting cell | 9.10e-08 | 9 |
carbohydrate secreting cell | 9.10e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.15e-09 | 3 |
tendon | 6.15e-09 | 3 |
regular connective tissue | 6.15e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.38e-09 | 3 |
leiomyoma | 2.38e-09 | 3 |
benign neoplasm | 4.26e-07 | 4 |