FFCP PHASE1:Hg19::chr12:52487330..52487335,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000546981_5end | |association_with_transcript=-17bp_to_ENST00000546981_5end | ||
|cluster_id=chr12:52487330..52487335,+ | |||
|coexpression_cluster_id=C2147 | |||
|description=CAGE_peak_2_at_ENST00000546981_5end | |description=CAGE_peak_2_at_ENST00000546981_5end | ||
|id=chr12:52487330..52487335,+ | |id=chr12:52487330..52487335,+ | ||
|ontology_enrichment_celltype=CL:0002535!9.25e-08!2 | |ontology_enrichment_celltype=CL:0002535!9.25e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.32e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.32e-26,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!3.98e-14!1;DOID:1357!3.98e-14!1 | |ontology_enrichment_disease=DOID:0050619!3.98e-14!1;DOID:1357!3.98e-14!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;5.12e-50;1!DOID:1357;5.12e-50;1!DOID:4362;2.66e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.99e-50,1;DOID:1357,3.99e-50,1;DOID:4362,2.66e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.78e-26!2;UBERON:0000341!8.70e-26!2;UBERON:0001764!3.98e-14!1;UBERON:0001825!3.98e-14!1;UBERON:0002171!5.15e-14!1;UBERON:0006518!5.15e-14!1;UBERON:0008949!5.15e-14!1;UBERON:0000101!5.15e-14!1;UBERON:0002167!5.15e-14!1;UBERON:0005178!6.40e-13!34;UBERON:0002224!6.40e-13!34;UBERON:0005181!1.53e-12!35;UBERON:0008947!1.58e-11!38;UBERON:0003258!1.58e-11!38;UBERON:0002048!2.67e-09!22;UBERON:0000117!2.67e-09!22;UBERON:0000171!2.67e-09!22;UBERON:0000170!2.67e-09!22;UBERON:0005597!2.67e-09!22;UBERON:0000118!2.67e-09!22;UBERON:0000915!2.50e-08!52;UBERON:0003126!3.45e-08!7;UBERON:0001005!3.45e-08!7;UBERON:0000065!3.64e-08!53;UBERON:0001004!6.04e-08!72;UBERON:0006955!9.25e-08!2;UBERON:0004801!9.25e-08!2;UBERON:0000464!7.42e-07!104 | |ontology_enrichment_uberon=UBERON:0003127!2.78e-26!2;UBERON:0000341!8.70e-26!2;UBERON:0001764!3.98e-14!1;UBERON:0001825!3.98e-14!1;UBERON:0002171!5.15e-14!1;UBERON:0006518!5.15e-14!1;UBERON:0008949!5.15e-14!1;UBERON:0000101!5.15e-14!1;UBERON:0002167!5.15e-14!1;UBERON:0005178!6.40e-13!34;UBERON:0002224!6.40e-13!34;UBERON:0005181!1.53e-12!35;UBERON:0008947!1.58e-11!38;UBERON:0003258!1.58e-11!38;UBERON:0002048!2.67e-09!22;UBERON:0000117!2.67e-09!22;UBERON:0000171!2.67e-09!22;UBERON:0000170!2.67e-09!22;UBERON:0005597!2.67e-09!22;UBERON:0000118!2.67e-09!22;UBERON:0000915!2.50e-08!52;UBERON:0003126!3.45e-08!7;UBERON:0001005!3.45e-08!7;UBERON:0000065!3.64e-08!53;UBERON:0001004!6.04e-08!72;UBERON:0006955!9.25e-08!2;UBERON:0004801!9.25e-08!2;UBERON:0000464!7.42e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.12e-50;1!UBERON:0001825;5.12e-50;1!UBERON:0006955;4.32e-26;2!UBERON:0004801;4.32e-26;2!UBERON:0003127;5.56e-26;2!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0003126;2.03e-08;7!UBERON:0001005;2.03e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.99e-50,1;UBERON:0001825,3.99e-50,1;UBERON:0006955,4.32e-26,2;UBERON:0004801,4.32e-26,2;UBERON:0003127,5.56e-26,2;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0003126,2.03e-08,7;UBERON:0001005,2.03e-08,7 | |||
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|short_description=p2@ENST00000546981 | |short_description=p2@ENST00000546981 | ||
}} | }} |
Latest revision as of 09:28, 24 July 2015
Short description: | p2@ENST00000546981 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000546981_5end |
Coexpression cluster: | C2147_argyrophil_lung_trachea_gastrointestinal_throat_caudate_aorta |
Association with transcript: | -17bp_to_ENST00000546981_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.32e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.99e-50 | 1 |
paranasal sinus | 3.99e-50 | 1 |
uterine epithelium | 4.32e-26 | 2 |
cervix epithelium | 4.32e-26 | 2 |
open tracheal system trachea | 5.56e-26 | 2 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
trachea | 2.03e-08 | 7 |
respiratory airway | 2.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.99e-50 | 1 |
maxillary sinus cancer | 3.99e-50 | 1 |
cervical cancer | 2.66e-11 | 5 |