FFCP PHASE1:Hg19::chr12:52845923..52845938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3854 | |EntrezGene=entrezgene:3854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6444 | |HGNC=HGNC:6444 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P04259 | |UniProt=uniprot:P04259 | ||
|association_with_transcript=-13bp_to_ENST00000252252,NM_005555,uc001sak.2_5end | |association_with_transcript=-13bp_to_ENST00000252252,NM_005555,uc001sak.2_5end | ||
|cluster_id=chr12:52845923..52845938,- | |||
|coexpression_cluster_id=C405 | |coexpression_cluster_id=C405 | ||
|description=CAGE_peak_1_at_KRT6B_5end | |description=CAGE_peak_1_at_KRT6B_5end |
Revision as of 09:32, 24 July 2015
Short description: | p1@KRT6B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT6B_5end |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | -13bp_to_ENST00000252252, NM_005555, uc001sak.2_5end |
EntrezGene: | 3854 |
HGNC: | 6444 |
UniProt: | P04259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@KRT6B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.20e-23 | 42 |
general ecto-epithelial cell | 2.29e-17 | 14 |
respiratory epithelial cell | 3.25e-17 | 13 |
endodermal cell | 6.97e-15 | 58 |
epithelial cell | 1.24e-13 | 253 |
acinar cell | 7.46e-13 | 5 |
ecto-epithelial cell | 1.31e-11 | 34 |
protein secreting cell | 1.24e-10 | 6 |
epithelial cell of alimentary canal | 1.30e-10 | 20 |
transitional epithelial cell | 5.82e-10 | 4 |
Showing 1 to 10 of 31 entries
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.34e-13 | 74 |
endoderm-derived structure | 1.44e-10 | 160 |
endoderm | 1.44e-10 | 160 |
presumptive endoderm | 1.44e-10 | 160 |
anterior region of body | 1.75e-10 | 62 |
craniocervical region | 1.75e-10 | 62 |
surface structure | 2.45e-10 | 99 |
oral opening | 1.95e-09 | 22 |
tracheobronchial tree | 2.73e-09 | 15 |
lower respiratory tract | 2.73e-09 | 15 |
Showing 1 to 10 of 25 entries