FFCP PHASE1:Hg19::chr12:52912754..52912774,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52912754..52912774,+ | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_at_chr12:52912754..52912774,+ | |description=CAGE_peak_at_chr12:52912754..52912774,+ | ||
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|ontology_enrichment_celltype=CL:0002076!3.65e-32!43;CL:0002368!1.48e-22!13;CL:0000066!4.04e-22!254;CL:0000223!9.50e-22!59;CL:0002251!3.12e-15!21;CL:0002159!4.94e-15!13;CL:0000244!8.64e-13!4;CL:0000731!8.64e-13!4;CL:0002202!1.68e-12!9;CL:0002632!1.68e-12!9;CL:0002328!1.79e-10!3;CL:0000068!2.23e-10!3;CL:0000069!2.23e-10!3;CL:0000307!2.23e-10!3;CL:0000377!2.23e-10!3;CL:0002166!3.56e-10!3;CL:0000076!4.79e-10!62;CL:0002621!1.11e-09!3;CL:0002327!2.04e-08!4;CL:0000575!6.48e-08!2;CL:0002077!7.48e-08!33 | |ontology_enrichment_celltype=CL:0002076!3.65e-32!43;CL:0002368!1.48e-22!13;CL:0000066!4.04e-22!254;CL:0000223!9.50e-22!59;CL:0002251!3.12e-15!21;CL:0002159!4.94e-15!13;CL:0000244!8.64e-13!4;CL:0000731!8.64e-13!4;CL:0002202!1.68e-12!9;CL:0002632!1.68e-12!9;CL:0002328!1.79e-10!3;CL:0000068!2.23e-10!3;CL:0000069!2.23e-10!3;CL:0000307!2.23e-10!3;CL:0000377!2.23e-10!3;CL:0002166!3.56e-10!3;CL:0000076!4.79e-10!62;CL:0002621!1.11e-09!3;CL:0002327!2.04e-08!4;CL:0000575!6.48e-08!2;CL:0002077!7.48e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.37e-19;14!CL:0002327;1.14e-18;4!CL:0000575;7.59e-17;2!CL:0002202;5.74e-14;9!CL:0002632;5.74e-14;9!CL:0000240;1.66e-12;6!CL:0000311;1.66e-12;6!CL:0000079;1.66e-12;6!CL:0000237;1.66e-12;6!CL:0002328;2.78e-11;3!CL:0000307;2.78e-11;3!CL:0002577;3.09e-11;3!CL:0002166;6.65e-11;3!CL:0002076;6.84e-10;42!CL:0002368;1.01e-09;13!CL:0002336;4.36e-09;1!CL:0002261;4.36e-09;1!CL:0002252;4.36e-09;1!CL:0002170;4.36e-09;1!CL:0000244;1.20e-08;4!CL:0000731;1.20e-08;4!CL:0002077;2.09e-07;34!CL:0000312;2.31e-07;5 | |ontology_enrichment_celltype_v019=CL:0002159;1.37e-19;14!CL:0002327;1.14e-18;4!CL:0000575;7.59e-17;2!CL:0002202;5.74e-14;9!CL:0002632;5.74e-14;9!CL:0000240;1.66e-12;6!CL:0000311;1.66e-12;6!CL:0000079;1.66e-12;6!CL:0000237;1.66e-12;6!CL:0002328;2.78e-11;3!CL:0000307;2.78e-11;3!CL:0002577;3.09e-11;3!CL:0002166;6.65e-11;3!CL:0002076;6.84e-10;42!CL:0002368;1.01e-09;13!CL:0002336;4.36e-09;1!CL:0002261;4.36e-09;1!CL:0002252;4.36e-09;1!CL:0002170;4.36e-09;1!CL:0000244;1.20e-08;4!CL:0000731;1.20e-08;4!CL:0002077;2.09e-07;34!CL:0000312;2.31e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.07e-19,14;CL:0002327,1.14e-18,4;CL:0000575,6.23e-17,2;CL:0002202,7.27e-14,9;CL:0002632,7.27e-14,9;CL:0002076,2.67e-13,42;CL:0000240,1.35e-12,6;CL:0000311,1.35e-12,6;CL:0000079,1.35e-12,6;CL:0000237,1.35e-12,6;CL:0000036,1.35e-12,6;CL:0000357,1.35e-12,6;CL:0000114,1.35e-12,6;CL:0000066,2.99e-12,253;CL:0002577,2.93e-11,3;CL:0000068,3.09e-11,3;CL:0000069,3.09e-11,3;CL:0000307,3.09e-11,3;CL:0000377,3.09e-11,3;CL:0002328,3.60e-11,3;CL:0002166,5.71e-11,3;CL:0002368,1.19e-09,13;CL:0000223,2.89e-09,58;CL:0002336,3.31e-09,1;CL:0002261,3.31e-09,1;CL:0002170,3.31e-09,1;CL:0002252,4.54e-09,1;CL:0000244,1.21e-08,4;CL:0000731,1.21e-08,4;CL:0002077,8.06e-08,34;CL:0000312,2.17e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;1.66e-12;6!CL:0000114;1.66e-12;6!CL:0000377;2.78e-11;3!CL:0000223;2.59e-07;58 | |ontology_enrichment_development_v019=CL:0000357;1.66e-12;6!CL:0000114;1.66e-12;6!CL:0000377;2.78e-11;3!CL:0000223;2.59e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!8.85e-19!14 | |ontology_enrichment_disease=DOID:1749!8.85e-19!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;4.36e-09;1!DOID:3149;4.36e-09;1 | |ontology_enrichment_disease_v019=DOID:3151;4.36e-09;1!DOID:3149;4.36e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,3.88e-09,1;DOID:3149,3.88e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000365!4.13e-15!5;UBERON:0001004!2.71e-13!72;UBERON:0004119!4.30e-13!169;UBERON:0000925!4.30e-13!169;UBERON:0006595!4.30e-13!169;UBERON:0005910!1.54e-12!6;UBERON:0000161!1.79e-11!35;UBERON:0004815!1.79e-10!3;UBERON:0002031!1.79e-10!3;UBERON:0007196!3.12e-10!14;UBERON:0001558!3.12e-10!14;UBERON:0003729!4.77e-10!5;UBERON:0000166!4.87e-10!21;UBERON:0001949!1.11e-09!3;UBERON:0000165!6.05e-09!28;UBERON:0000930!6.05e-09!28;UBERON:0001911!2.04e-08!4;UBERON:0005333!2.04e-08!4;UBERON:0008425!2.04e-08!4;UBERON:0005311!2.04e-08!4;UBERON:0003102!4.79e-08!95;UBERON:0002185!6.06e-08!4;UBERON:0001708!1.01e-07!4;UBERON:0001704!1.01e-07!4;UBERON:0003126!2.49e-07!7;UBERON:0001005!2.49e-07!7;UBERON:0003343!3.17e-07!4;UBERON:0004785!3.17e-07!4;UBERON:0000065!6.01e-07!53 | |ontology_enrichment_uberon=UBERON:0000365!4.13e-15!5;UBERON:0001004!2.71e-13!72;UBERON:0004119!4.30e-13!169;UBERON:0000925!4.30e-13!169;UBERON:0006595!4.30e-13!169;UBERON:0005910!1.54e-12!6;UBERON:0000161!1.79e-11!35;UBERON:0004815!1.79e-10!3;UBERON:0002031!1.79e-10!3;UBERON:0007196!3.12e-10!14;UBERON:0001558!3.12e-10!14;UBERON:0003729!4.77e-10!5;UBERON:0000166!4.87e-10!21;UBERON:0001949!1.11e-09!3;UBERON:0000165!6.05e-09!28;UBERON:0000930!6.05e-09!28;UBERON:0001911!2.04e-08!4;UBERON:0005333!2.04e-08!4;UBERON:0008425!2.04e-08!4;UBERON:0005311!2.04e-08!4;UBERON:0003102!4.79e-08!95;UBERON:0002185!6.06e-08!4;UBERON:0001708!1.01e-07!4;UBERON:0001704!1.01e-07!4;UBERON:0003126!2.49e-07!7;UBERON:0001005!2.49e-07!7;UBERON:0003343!3.17e-07!4;UBERON:0004785!3.17e-07!4;UBERON:0000065!6.01e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.14e-18;4!UBERON:0004815;2.78e-11;3!UBERON:0002031;2.78e-11;3!UBERON:0000964;7.14e-09;4!UBERON:0010409;7.14e-09;4!UBERON:0001987;1.20e-08;4!UBERON:0007196;1.92e-08;15!UBERON:0001558;1.92e-08;15!UBERON:0001708;2.13e-08;4!UBERON:0008895;2.13e-08;4!UBERON:0002185;4.16e-07;5!UBERON:0000365;4.42e-07;5!UBERON:0011159;6.97e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001911;1.14e-18;4!UBERON:0004815;2.78e-11;3!UBERON:0002031;2.78e-11;3!UBERON:0000964;7.14e-09;4!UBERON:0010409;7.14e-09;4!UBERON:0001987;1.20e-08;4!UBERON:0007196;1.92e-08;15!UBERON:0001558;1.92e-08;15!UBERON:0001708;2.13e-08;4!UBERON:0008895;2.13e-08;4!UBERON:0002185;4.16e-07;5!UBERON:0000365;4.42e-07;5!UBERON:0011159;6.97e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.14e-18,4;UBERON:0005333,1.14e-18,4;UBERON:0008425,1.14e-18,4;UBERON:0005311,1.14e-18,4;UBERON:0004815,3.60e-11,3;UBERON:0002031,3.60e-11,3;UBERON:0000076,1.35e-09,8;UBERON:0005157,1.46e-09,47;UBERON:0003102,4.88e-09,99;UBERON:0000964,6.48e-09,4;UBERON:0010409,6.48e-09,4;UBERON:0004348,6.48e-09,4;UBERON:0005427,6.48e-09,4;UBERON:0001987,1.16e-08,4;UBERON:0004340,1.16e-08,4;UBERON:0001708,1.91e-08,4;UBERON:0008895,1.91e-08,4;UBERON:0007196,2.20e-08,15;UBERON:0001558,2.20e-08,15;UBERON:0000033,1.23e-07,56;UBERON:0005153,4.35e-07,37;UBERON:0000365,4.43e-07,5;UBERON:0002185,4.85e-07,5;UBERON:0011159,6.37e-07,5;UBERON:0000153,8.56e-07,62;UBERON:0007811,8.56e-07,62 | |||
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|short_description=p@chr12:52912754..52912774,+ | |short_description=p@chr12:52912754..52912774,+ | ||
}} | }} |
Latest revision as of 09:37, 24 July 2015
Short description: | p@chr12:52912754..52912774, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52912754..52912774, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.14e-18 | 4 |
mammary bud | 1.14e-18 | 4 |
mammary ridge | 1.14e-18 | 4 |
mammary placode | 1.14e-18 | 4 |
lower respiratory tract epithelium | 3.60e-11 | 3 |
epithelium of bronchus | 3.60e-11 | 3 |
external ectoderm | 1.35e-09 | 8 |
epithelial fold | 1.46e-09 | 47 |
surface structure | 4.88e-09 | 99 |
cornea | 6.48e-09 | 4 |
eye surface | 6.48e-09 | 4 |
optic eminence | 6.48e-09 | 4 |
corneal primordium | 6.48e-09 | 4 |
placenta | 1.16e-08 | 4 |
allantois | 1.16e-08 | 4 |
jaw skeleton | 1.91e-08 | 4 |
splanchnocranium | 1.91e-08 | 4 |
tracheobronchial tree | 2.20e-08 | 15 |
lower respiratory tract | 2.20e-08 | 15 |
head | 1.23e-07 | 56 |
epithelial bud | 4.35e-07 | 37 |
urothelium | 4.43e-07 | 5 |
bronchus | 4.85e-07 | 5 |
primary subdivision of cranial skeletal system | 6.37e-07 | 5 |
anterior region of body | 8.56e-07 | 62 |
craniocervical region | 8.56e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.88e-09 | 1 |
keratoacanthoma | 3.88e-09 | 1 |