FFCP PHASE1:Hg19::chr12:53693418..53693439,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-290bp_to_CU687581_5end | |association_with_transcript=-290bp_to_CU687581_5end | ||
|cluster_id=chr12:53693418..53693439,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_CU687581_5end | |description=CAGE_peak_1_at_CU687581_5end | ||
|id=chr12:53693418..53693439,- | |id=chr12:53693418..53693439,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.83e-14;3!CL:1000428;1.83e-14;3!CL:0002559;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.83e-14,3;CL:1000428,1.83e-14,3;CL:0002559,3.22e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.43e-11!69;UBERON:0006238!2.43e-11!69;UBERON:0002616!2.45e-11!59;UBERON:0005743!2.13e-10!86;UBERON:0001017!5.17e-10!82;UBERON:0007023!1.12e-09!115;UBERON:0001896!2.28e-09!3;UBERON:0005290!2.28e-09!3;UBERON:0010096!2.28e-09!3;UBERON:0001049!5.41e-09!57;UBERON:0005068!5.41e-09!57;UBERON:0006241!5.41e-09!57;UBERON:0007135!5.41e-09!57;UBERON:0000073!5.88e-09!94;UBERON:0001016!5.88e-09!94;UBERON:0002298!9.54e-09!8;UBERON:0000153!1.36e-07!129;UBERON:0007811!1.36e-07!129;UBERON:0000033!2.31e-07!123;UBERON:0002346!6.58e-07!90 | |ontology_enrichment_uberon=UBERON:0000955!2.43e-11!69;UBERON:0006238!2.43e-11!69;UBERON:0002616!2.45e-11!59;UBERON:0005743!2.13e-10!86;UBERON:0001017!5.17e-10!82;UBERON:0007023!1.12e-09!115;UBERON:0001896!2.28e-09!3;UBERON:0005290!2.28e-09!3;UBERON:0010096!2.28e-09!3;UBERON:0001049!5.41e-09!57;UBERON:0005068!5.41e-09!57;UBERON:0006241!5.41e-09!57;UBERON:0007135!5.41e-09!57;UBERON:0000073!5.88e-09!94;UBERON:0001016!5.88e-09!94;UBERON:0002298!9.54e-09!8;UBERON:0000153!1.36e-07!129;UBERON:0007811!1.36e-07!129;UBERON:0000033!2.31e-07!123;UBERON:0002346!6.58e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000412;1.83e-14;3!UBERON:0001992;1.83e-14;3!UBERON:0002073;3.22e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000412,1.83e-14,3;UBERON:0001992,1.83e-14,3;UBERON:0002073,3.22e-09,5;UBERON:0005086,3.22e-09,5;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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| ||
|short_description=p1@CU687581 | |short_description=p1@CU687581 | ||
}} | }} |
Latest revision as of 09:49, 24 July 2015
Short description: | p1@CU687581 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU687581_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -290bp_to_CU687581_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.83e-14 | 3 |
stem cell of epidermis | 1.83e-14 | 3 |
hair follicle cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
dermal papilla | 1.83e-14 | 3 |
papillary layer of dermis | 1.83e-14 | 3 |
hair follicle | 3.22e-09 | 5 |
hair follicle placode | 3.22e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |