FFCP PHASE1:Hg19::chr12:56350891..56350902,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56350891..56350902,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_at_chr12:56350891..56350902,- | |description=CAGE_peak_at_chr12:56350891..56350902,- | ||
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|ontology_enrichment_celltype=CL:0000147!3.71e-77!14;CL:0000148!6.89e-58!10;CL:0000541!6.89e-58!10;CL:0000149!1.05e-36!4;CL:0000710!1.61e-28!20;CL:0002586!1.19e-27!3;CL:0000325!1.11e-26!39;CL:0000075!6.95e-21!27;CL:0002077!6.52e-17!33;CL:0002567!1.60e-13!3;CL:0000333!9.51e-13!41;CL:0000133!5.45e-11!59;CL:0002566!1.08e-10!1;CL:0000221!5.67e-09!71;CL:0002322!5.61e-08!5 | |ontology_enrichment_celltype=CL:0000147!3.71e-77!14;CL:0000148!6.89e-58!10;CL:0000541!6.89e-58!10;CL:0000149!1.05e-36!4;CL:0000710!1.61e-28!20;CL:0002586!1.19e-27!3;CL:0000325!1.11e-26!39;CL:0000075!6.95e-21!27;CL:0002077!6.52e-17!33;CL:0002567!1.60e-13!3;CL:0000333!9.51e-13!41;CL:0000133!5.45e-11!59;CL:0002566!1.08e-10!1;CL:0000221!5.67e-09!71;CL:0002322!5.61e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.16e-101;10!CL:0000147;2.99e-72;14!CL:0000710;9.23e-51;20!CL:0002567;1.80e-38;3!CL:0000075;9.63e-38;27!CL:0002566;3.16e-29;1!CL:0002077;4.15e-28;34!CL:0000149;1.82e-08;4 | |ontology_enrichment_celltype_v019=CL:0000148;7.16e-101;10!CL:0000147;2.99e-72;14!CL:0000710;9.23e-51;20!CL:0002567;1.80e-38;3!CL:0000075;9.63e-38;27!CL:0002566;3.16e-29;1!CL:0002077;4.15e-28;34!CL:0000149;1.82e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.02e-101,10;CL:0000541,6.02e-101,10;CL:0000147,2.65e-72,14;CL:0000710,8.47e-51,20;CL:0002567,1.80e-38,3;CL:0000075,9.04e-38,27;CL:0002077,4.29e-30,34;CL:0002566,3.16e-29,1;CL:0000333,6.92e-24,41;CL:0000133,6.05e-17,59;CL:0000221,5.08e-14,72;CL:0000149,1.82e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;2.62e-09;59!CL:0000221;7.01e-08;72 | |ontology_enrichment_development_v019=CL:0000133;2.62e-09;59!CL:0000221;7.01e-08;72 | ||
|ontology_enrichment_disease=DOID:1909!1.97e-19!2 | |ontology_enrichment_disease=DOID:1909!1.97e-19!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.78e-15;2 | |ontology_enrichment_disease_v019=DOID:1909;1.78e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!4.96e-29!5;UBERON:0005388!4.96e-29!5;UBERON:0001802!4.96e-29!5;UBERON:0001781!1.19e-27!3;UBERON:0001782!1.19e-27!3;UBERON:0005424!1.19e-27!3;UBERON:0000970!3.19e-11!20;UBERON:0002104!1.11e-10!21;UBERON:0000020!9.68e-10!23;UBERON:0001032!2.50e-09!24;UBERON:0004456!2.50e-09!24;UBERON:0007625!5.88e-08!11;UBERON:0000019!8.30e-08!19;UBERON:0000047!8.30e-08!19;UBERON:0004088!8.30e-08!19;UBERON:0003072!8.30e-08!19;UBERON:0003071!8.30e-08!19;UBERON:0004128!8.30e-08!19;UBERON:0005085!1.18e-07!29;UBERON:0001456!4.47e-07!21 | |ontology_enrichment_uberon=UBERON:0000966!4.96e-29!5;UBERON:0005388!4.96e-29!5;UBERON:0001802!4.96e-29!5;UBERON:0001781!1.19e-27!3;UBERON:0001782!1.19e-27!3;UBERON:0005424!1.19e-27!3;UBERON:0000970!3.19e-11!20;UBERON:0002104!1.11e-10!21;UBERON:0000020!9.68e-10!23;UBERON:0001032!2.50e-09!24;UBERON:0004456!2.50e-09!24;UBERON:0007625!5.88e-08!11;UBERON:0000019!8.30e-08!19;UBERON:0000047!8.30e-08!19;UBERON:0004088!8.30e-08!19;UBERON:0003072!8.30e-08!19;UBERON:0003071!8.30e-08!19;UBERON:0004128!8.30e-08!19;UBERON:0005085!1.18e-07!29;UBERON:0001456!4.47e-07!21 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,2.6669115602711,1.14596527667483,11.7217447210047,0,5.44985711327615,10.812350082381,5.71652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,5.42384133735438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,2.6669115602711,1.14596527667483,11.7217447210047,0,5.44985711327615,10.812350082381,5.71652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,5.42384133735438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:56350891..56350902,- | |short_description=p@chr12:56350891..56350902,- | ||
}} | }} |
Latest revision as of 10:16, 24 July 2015
Short description: | p@chr12:56350891..56350902, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56350891..56350902, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.02e-101 | 10 |
melanoblast | 6.02e-101 | 10 |
pigment cell | 2.65e-72 | 14 |
neurecto-epithelial cell | 8.47e-51 | 20 |
light melanocyte | 1.80e-38 | 3 |
columnar/cuboidal epithelial cell | 9.04e-38 | 27 |
ecto-epithelial cell | 4.29e-30 | 34 |
dark melanocyte | 3.16e-29 | 1 |
migratory neural crest cell | 6.92e-24 | 41 |
neurectodermal cell | 6.05e-17 | 59 |
ectodermal cell | 5.08e-14 | 72 |
visual pigment cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.05e-15 | 2 |