FFCP PHASE1:Hg19::chr12:56351803..56351813,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56351803..56351813,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_at_chr12:56351803..56351813,- | |description=CAGE_peak_at_chr12:56351803..56351813,- | ||
|id=chr12:56351803..56351813,- | |id=chr12:56351803..56351813,- | ||
|ontology_enrichment_celltype=CL:0000147!3.82e-74!14;CL:0000148!4.34e-70!10;CL:0000541!4.34e-70!10;CL:0000710!1.75e-34!20;CL:0000325!2.31e-30!39;CL:0002567!1.91e-27!3;CL:0000075!3.13e-25!27;CL:0002077!4.44e-25!33;CL:0000149!1.50e-20!4;CL:0002322!5.94e-16!5;CL:0000333!2.25e-15!41;CL:0002586!1.26e-12!3;CL:0000221!1.67e-10!71;CL:0000133!1.87e-10!59;CL:0002566!2.59e-10!1 | |ontology_enrichment_celltype=CL:0000147!3.82e-74!14;CL:0000148!4.34e-70!10;CL:0000541!4.34e-70!10;CL:0000710!1.75e-34!20;CL:0000325!2.31e-30!39;CL:0002567!1.91e-27!3;CL:0000075!3.13e-25!27;CL:0002077!4.44e-25!33;CL:0000149!1.50e-20!4;CL:0002322!5.94e-16!5;CL:0000333!2.25e-15!41;CL:0002586!1.26e-12!3;CL:0000221!1.67e-10!71;CL:0000133!1.87e-10!59;CL:0002566!2.59e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.63e-82;10!CL:0000147;7.26e-59;14!CL:0002567;7.81e-45;3!CL:0000710;1.91e-41;20!CL:0002566;9.85e-34;1!CL:0000075;6.88e-31;27!CL:0002077;2.47e-20;34!CL:0000149;1.12e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.03e-82,10;CL:0000541,5.03e-82,10;CL:0000147,7.71e-59,14;CL:0002567,7.81e-45,3;CL:0000710,1.99e-41,20;CL:0002566,9.85e-34,1;CL:0000075,7.10e-31,27;CL:0002077,1.18e-24,34;CL:0000333,1.27e-19,41;CL:0000133,5.41e-14,59;CL:0000221,1.28e-11,72;CL:0000149,1.12e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000133;9.61e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!1.71e-18!2 | |ontology_enrichment_disease=DOID:1909!1.71e-18!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;9.87e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.07e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.73e-16!5;UBERON:0005388!2.73e-16!5;UBERON:0001802!2.73e-16!5;UBERON:0001781!1.26e-12!3;UBERON:0001782!1.26e-12!3;UBERON:0005424!1.26e-12!3;UBERON:0000989!4.06e-10!1;UBERON:0008811!4.06e-10!1;UBERON:0006258!4.06e-10!1;UBERON:0005876!4.06e-10!1;UBERON:0004874!4.06e-10!1;UBERON:0000970!3.31e-07!20;UBERON:0002104!7.20e-07!21 | |ontology_enrichment_uberon=UBERON:0000966!2.73e-16!5;UBERON:0005388!2.73e-16!5;UBERON:0001802!2.73e-16!5;UBERON:0001781!1.26e-12!3;UBERON:0001782!1.26e-12!3;UBERON:0005424!1.26e-12!3;UBERON:0000989!4.06e-10!1;UBERON:0008811!4.06e-10!1;UBERON:0006258!4.06e-10!1;UBERON:0005876!4.06e-10!1;UBERON:0004874!4.06e-10!1;UBERON:0000970!3.31e-07!20;UBERON:0002104!7.20e-07!21 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:56351803..56351813,- | |short_description=p@chr12:56351803..56351813,- | ||
}} | }} |
Latest revision as of 10:16, 24 July 2015
Short description: | p@chr12:56351803..56351813, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56351803..56351813, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.03e-82 | 10 |
melanoblast | 5.03e-82 | 10 |
pigment cell | 7.71e-59 | 14 |
light melanocyte | 7.81e-45 | 3 |
neurecto-epithelial cell | 1.99e-41 | 20 |
dark melanocyte | 9.85e-34 | 1 |
columnar/cuboidal epithelial cell | 7.10e-31 | 27 |
ecto-epithelial cell | 1.18e-24 | 34 |
migratory neural crest cell | 1.27e-19 | 41 |
neurectodermal cell | 5.41e-14 | 59 |
ectodermal cell | 1.28e-11 | 72 |
visual pigment cell | 1.12e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.07e-18 | 2 |