FFCP PHASE1:Hg19::chr12:66035928..66035945,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000535315,ENST00000537298_5end | |association_with_transcript=0bp_to_ENST00000535315,ENST00000537298_5end | ||
|cluster_id=chr12:66035928..66035945,- | |||
|coexpression_cluster_id=C341 | |||
|description=CAGE_peak_1_at_ENST00000535315_5end,CAGE_peak_1_at_ENST00000537298_5end | |description=CAGE_peak_1_at_ENST00000535315_5end,CAGE_peak_1_at_ENST00000537298_5end | ||
|id=chr12:66035928..66035945,- | |id=chr12:66035928..66035945,- | ||
|ontology_enrichment_celltype=CL:0000188!2.99e-20!9;CL:0000055!1.14e-16!180;CL:1000306!4.32e-16!4;CL:0002547!4.32e-16!4;CL:0000594!6.96e-12!3;CL:0002551!6.03e-11!6;CL:0000148!5.58e-10!10;CL:0000541!5.58e-10!10;CL:0000680!3.10e-07!57;CL:0000056!3.10e-07!57;CL:0000355!3.10e-07!57;CL:0000147!4.99e-07!14;CL:0000183!6.84e-07!59 | |ontology_enrichment_celltype=CL:0000188!2.99e-20!9;CL:0000055!1.14e-16!180;CL:1000306!4.32e-16!4;CL:0002547!4.32e-16!4;CL:0000594!6.96e-12!3;CL:0002551!6.03e-11!6;CL:0000148!5.58e-10!10;CL:0000541!5.58e-10!10;CL:0000680!3.10e-07!57;CL:0000056!3.10e-07!57;CL:0000355!3.10e-07!57;CL:0000147!4.99e-07!14;CL:0000183!6.84e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002551;1.46e-13;6!CL:0002567;8.09e-13;3!CL:0002566;8.24e-10;1!CL:1000306;1.55e-09;4!CL:0002547;1.55e-09;4!CL:0000188;4.09e-09;9!CL:0000148;1.98e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,1.40e-13,6;CL:0002567,7.86e-13,3;CL:0002566,6.91e-10,1;CL:1000306,1.52e-09,4;CL:0002547,1.52e-09,4;CL:0000188,5.05e-09,9;CL:0000148,1.86e-08,10;CL:0000541,1.86e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;8.24e-10;1!DOID:3165;8.24e-10;1!DOID:0060121;8.24e-10;1!DOID:2438;8.24e-10;1!DOID:4418;8.24e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.33e-10,1;DOID:3165,6.33e-10,1;DOID:0060121,6.33e-10,1;DOID:2438,6.33e-10,1;DOID:4418,6.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000415!4.32e-16!4;UBERON:0007240!4.32e-16!4;UBERON:0005742!4.32e-16!4;UBERON:0005734!4.32e-16!4;UBERON:0004664!4.32e-16!4;UBERON:0004663!4.32e-16!4;UBERON:0004290!4.79e-12!70;UBERON:0002067!5.14e-11!9;UBERON:0004016!5.14e-11!9;UBERON:0010083!5.14e-11!9;UBERON:0000914!7.74e-11!83;UBERON:0002329!7.74e-11!83;UBERON:0003077!7.74e-11!83;UBERON:0003059!7.74e-11!83;UBERON:0007282!7.74e-11!83;UBERON:0009618!7.74e-11!83;UBERON:0007285!7.74e-11!83;UBERON:0000486!1.02e-09!82;UBERON:0000060!5.19e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.63e-15;9!UBERON:0004797;1.55e-09;4!UBERON:0000415;1.55e-09;4!UBERON:0007240;1.55e-09;4!UBERON:0005742;1.55e-09;4!UBERON:0005734;1.55e-09;4!UBERON:0004664;1.55e-09;4!UBERON:0004663;1.55e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.63e-15,9;UBERON:0004016,1.63e-15,9;UBERON:0010083,1.63e-15,9;UBERON:0000415,1.52e-09,4;UBERON:0007240,1.52e-09,4;UBERON:0005742,1.52e-09,4;UBERON:0005734,1.52e-09,4;UBERON:0004664,1.52e-09,4;UBERON:0004663,1.52e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,2.25095607382472,1.72101972449288,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,9.51219439014496,1.13311061057692,1.82586048712923,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77794104018073,11.0776643411901,2.34434894420094,0,0.616964956219941,0,0.285826432630578,0,0,0,0,0,7.607724773004,0,0,0,0,0,0,0,0,8.14340460734338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,2.00263202249038,1.07452572308291,1.24052915236078,0.214840489736547,0.145016693914229,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56989728039846,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12297182853627,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,1.78843150532691,0,0,0,0,0,0,0,0,0,54.6711156487903,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.5120908602398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41981274481676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73732298598512,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44868263254949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,2.25095607382472,1.72101972449288,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,9.51219439014496,1.13311061057692,1.82586048712923,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77794104018073,11.0776643411901,2.34434894420094,0,0.616964956219941,0,0.285826432630578,0,0,0,0,0,7.607724773004,0,0,0,0,0,0,0,0,8.14340460734338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,2.00263202249038,1.07452572308291,1.24052915236078,0.214840489736547,0.145016693914229,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56989728039846,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12297182853627,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,1.78843150532691,0,0,0,0,0,0,0,0,0,54.6711156487903,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.5120908602398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41981274481676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73732298598512,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44868263254949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000535315,p1@ENST00000537298 | |short_description=p1@ENST00000535315,p1@ENST00000537298 | ||
}} | }} |
Latest revision as of 11:26, 24 July 2015
Short description: | p1@ENST00000535315, p1@ENST00000537298 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000535315_5end, CAGE_peak_1_at_ENST00000537298_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | 0bp_to_ENST00000535315, ENST00000537298_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 1.40e-13 | 6 |
light melanocyte | 7.86e-13 | 3 |
dark melanocyte | 6.91e-10 | 1 |
fibroblast of tunica adventitia of artery | 1.52e-09 | 4 |
fibroblast of the aortic adventitia | 1.52e-09 | 4 |
cell of skeletal muscle | 5.05e-09 | 9 |
melanocyte | 1.86e-08 | 10 |
melanoblast | 1.86e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.63e-15 | 9 |
dermatome | 1.63e-15 | 9 |
future dermis | 1.63e-15 | 9 |
artery wall | 1.52e-09 | 4 |
tunica adventitia of artery | 1.52e-09 | 4 |
adventitia | 1.52e-09 | 4 |
tunica adventitia of blood vessel | 1.52e-09 | 4 |
aorta tunica adventitia | 1.52e-09 | 4 |
aorta wall | 1.52e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.33e-10 | 1 |
skin benign neoplasm | 6.33e-10 | 1 |
integumentary system benign neoplasm | 6.33e-10 | 1 |
dermis tumor | 6.33e-10 | 1 |
cutaneous fibrous histiocytoma | 6.33e-10 | 1 |