FFCP PHASE1:Hg19::chr12:66035988..66035995,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000537250_5end | |association_with_transcript=-10bp_to_ENST00000537250_5end | ||
|cluster_id=chr12:66035988..66035995,- | |||
|coexpression_cluster_id=C341 | |||
|description=CAGE_peak_2_at_ENST00000537250_5end | |description=CAGE_peak_2_at_ENST00000537250_5end | ||
|id=chr12:66035988..66035995,- | |id=chr12:66035988..66035995,- | ||
|ontology_enrichment_celltype=CL:0000188!8.21e-20!9;CL:0002551!7.91e-12!6;CL:0002567!2.41e-11!3;CL:0000594!2.26e-10!3;CL:0002561!9.02e-09!1;CL:0000055!2.46e-07!180 | |ontology_enrichment_celltype=CL:0000188!8.21e-20!9;CL:0002551!7.91e-12!6;CL:0002567!2.41e-11!3;CL:0000594!2.26e-10!3;CL:0002561!9.02e-09!1;CL:0000055!2.46e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002567;4.28e-53;3!CL:0000148;8.46e-17;10!CL:0000147;2.59e-12;14!CL:0000710;6.30e-09;20!CL:0000075;7.34e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,4.89e-53,3;CL:0000148,8.81e-17,10;CL:0000541,8.81e-17,10;CL:0000147,2.66e-12,14;CL:0000710,6.42e-09,20;CL:0000075,7.45e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!5.70e-09!1;DOID:3165!5.70e-09!1;DOID:0060121!5.70e-09!1;DOID:2438!5.70e-09!1;DOID:4418!5.70e-09!1;DOID:5662!7.75e-09!1;DOID:3371!1.65e-08!1;DOID:4549!1.65e-08!1;DOID:5861!1.65e-08!1;DOID:6496!1.65e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.40e-14;3!DOID:3908;2.74e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.40e-14,3;DOID:3908,2.74e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0005933!9.02e-09!1;UBERON:0005942!9.02e-09!1;UBERON:0005932!9.02e-09!1;UBERON:0002067!4.78e-08!9;UBERON:0004016!4.78e-08!9;UBERON:0010083!4.78e-08!9;UBERON:0004290!4.58e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@ENST00000537250 | |short_description=p2@ENST00000537250 | ||
}} | }} |
Latest revision as of 11:26, 24 July 2015
Short description: | p2@ENST00000537250 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000537250_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | -10bp_to_ENST00000537250_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 4.89e-53 | 3 |
melanocyte | 8.81e-17 | 10 |
melanoblast | 8.81e-17 | 10 |
pigment cell | 2.66e-12 | 14 |
neurecto-epithelial cell | 6.42e-09 | 20 |
columnar/cuboidal epithelial cell | 7.45e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.40e-14 | 3 |
non-small cell lung carcinoma | 2.74e-09 | 5 |