FFCP PHASE1:Hg19::chr12:98739159..98739191,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:98739159..98739191,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr12:98739159..98739191,- | |||
|id=chr12:98739159..98739191,- | |||
|ontology_enrichment_celltype=CL:0002159!9.61e-35!13;CL:0002368!4.32e-18!13;CL:0000362!4.25e-17!8;CL:0002076!1.17e-16!43;CL:0000240!2.31e-16!6;CL:0000311!2.31e-16!6;CL:0000079!2.31e-16!6;CL:0000237!2.31e-16!6;CL:0000036!2.31e-16!6;CL:0000357!2.31e-16!6;CL:0000114!2.31e-16!6;CL:0000066!5.56e-16!254;CL:0002077!1.86e-14!33;CL:0002166!3.25e-13!3;CL:0002621!6.63e-13!3;CL:0000223!7.71e-13!59;CL:0000312!9.66e-13!5;CL:0000076!2.48e-10!62;CL:0000039!3.87e-09!7;CL:0000586!3.87e-09!7;CL:0000317!7.69e-09!2;CL:1000448!7.69e-09!2;CL:0002308!7.69e-09!2;CL:0002140!7.69e-09!2;CL:0000575!1.01e-08!2;CL:0000220!4.08e-08!246;CL:0002321!5.40e-08!248;CL:0000221!2.70e-07!71;CL:0002202!4.09e-07!9;CL:0002632!4.09e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002166;4.93e-60;3!CL:0002159;3.85e-23;14!CL:0002336;5.71e-21;1!CL:0002261;5.71e-21;1!CL:0002170;5.71e-21;1!CL:0000240;3.36e-14;6!CL:0000311;3.36e-14;6!CL:0000079;3.36e-14;6!CL:0000237;3.36e-14;6!CL:0002077;8.10e-09;34!CL:0002541;7.02e-08;3!CL:0000307;7.02e-08;3!CL:0002621;7.02e-08;3!CL:0002076;2.39e-07;42!CL:0002368;5.26e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,5.46e-60,3;CL:0002159,3.96e-23,14;CL:0002336,4.22e-21,1;CL:0002261,4.22e-21,1;CL:0002170,4.22e-21,1;CL:0000240,3.04e-14,6;CL:0000311,3.04e-14,6;CL:0000079,3.04e-14,6;CL:0000237,3.04e-14,6;CL:0000036,3.04e-14,6;CL:0000357,3.04e-14,6;CL:0000114,3.04e-14,6;CL:0002077,9.17e-10,34;CL:0002621,5.93e-08,3;CL:0002076,6.97e-08,42;CL:0000068,7.76e-08,3;CL:0000069,7.76e-08,3;CL:0000307,7.76e-08,3;CL:0000377,7.76e-08,3;CL:0002541,8.29e-08,3;CL:0002368,5.42e-07,13;CL:0000221,7.72e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000357;3.36e-14;6!CL:0000114;3.36e-14;6!CL:0000377;7.02e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!6.63e-13!3;UBERON:0000473!5.45e-12!8;UBERON:0001708!5.22e-10!4;UBERON:0001704!5.22e-10!4;UBERON:0001003!1.78e-09!14;UBERON:0007376!1.78e-09!14;UBERON:0007383!1.78e-09!14;UBERON:0002419!7.69e-09!2;UBERON:0007771!7.69e-09!2;UBERON:0003297!7.69e-09!2;UBERON:0001821!7.69e-09!2;UBERON:0003487!7.69e-09!2;UBERON:0001820!7.69e-09!2;UBERON:0005089!7.69e-09!2;UBERON:0005088!7.69e-09!2;UBERON:0003135!1.25e-08!11;UBERON:0003101!1.86e-07!22;UBERON:0000079!1.86e-07!22;UBERON:0002090!8.75e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.87e-45;4!UBERON:0008895;2.87e-45;4!UBERON:0011159;2.13e-36;5!UBERON:0011137;5.55e-17;11!UBERON:0010323;5.55e-17;11!UBERON:0000075;6.86e-12;16!UBERON:0003124;7.02e-08;3!UBERON:0001949;7.02e-08;3!UBERON:0000920;7.02e-08;3!UBERON:0004765;1.51e-07;26!UBERON:0003729;5.26e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.10e-45,4;UBERON:0008895,3.10e-45,4;UBERON:0011159,2.26e-36,5;UBERON:0010188,1.86e-30,6;UBERON:0002539,1.86e-30,6;UBERON:0008816,1.86e-30,6;UBERON:0010323,5.70e-17,11;UBERON:0011137,1.75e-13,14;UBERON:0000075,6.99e-12,16;UBERON:0008814,1.24e-10,18;UBERON:0000033,5.14e-09,56;UBERON:0000153,3.78e-08,62;UBERON:0007811,3.78e-08,62;UBERON:0001949,5.93e-08,3;UBERON:0000920,8.29e-08,3;UBERON:0003102,3.76e-07,99;UBERON:0003729,4.66e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,0.818238361772504,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,2.24803506515239,0.502644862058154,1.85176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,3.35964256397719,1.55952606966625,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.576570202095319,1.65896526242959,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,1.08890984861323,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870592065804026,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815910637935854,0.534434810531121,14.5193941265055,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:98739159..98739191,- | |||
}} |
Latest revision as of 14:01, 24 July 2015
Short description: | p@chr12:98739159..98739191, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:98739159..98739191, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 5.46e-60 | 3 |
general ecto-epithelial cell | 3.96e-23 | 14 |
buccal mucosa cell | 4.22e-21 | 1 |
endothelial cell of viscerocranial mucosa | 4.22e-21 | 1 |
keratinized cell of the oral mucosa | 4.22e-21 | 1 |
stratified squamous epithelial cell | 3.04e-14 | 6 |
keratin accumulating cell | 3.04e-14 | 6 |
stratified epithelial cell | 3.04e-14 | 6 |
keratinizing barrier epithelial cell | 3.04e-14 | 6 |
epithelial fate stem cell | 3.04e-14 | 6 |
stratified epithelial stem cell | 3.04e-14 | 6 |
surface ectodermal cell | 3.04e-14 | 6 |
ecto-epithelial cell | 9.17e-10 | 34 |
gingival epithelial cell | 5.93e-08 | 3 |
endo-epithelial cell | 6.97e-08 | 42 |
duct epithelial cell | 7.76e-08 | 3 |
branched duct epithelial cell | 7.76e-08 | 3 |
tracheal epithelial cell | 7.76e-08 | 3 |
tracheoblast | 7.76e-08 | 3 |
chorionic membrane mesenchymal stem cell | 8.29e-08 | 3 |
respiratory epithelial cell | 5.42e-07 | 13 |
ectodermal cell | 7.72e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.10e-45 | 4 |
splanchnocranium | 3.10e-45 | 4 |
primary subdivision of cranial skeletal system | 2.26e-36 | 5 |
protuberance | 1.86e-30 | 6 |
pharyngeal arch | 1.86e-30 | 6 |
embryonic head | 1.86e-30 | 6 |
cranial skeletal system | 5.70e-17 | 11 |
axial skeletal system | 1.75e-13 | 14 |
subdivision of skeletal system | 6.99e-12 | 16 |
pharyngeal arch system | 1.24e-10 | 18 |
head | 5.14e-09 | 56 |
anterior region of body | 3.78e-08 | 62 |
craniocervical region | 3.78e-08 | 62 |
gingival epithelium | 5.93e-08 | 3 |
egg chorion | 8.29e-08 | 3 |
surface structure | 3.76e-07 | 99 |
mouth mucosa | 4.66e-07 | 13 |