FFCP PHASE1:Hg19::chr13:110746992..110747011,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110746992..110747011,- | |||
|description=CAGE_peak_at_chr13:110746992..110747011,- | |description=CAGE_peak_at_chr13:110746992..110747011,- | ||
|id=chr13:110746992..110747011,- | |id=chr13:110746992..110747011,- | ||
|ontology_enrichment_celltype=CL:0002368!2.30e-10!13;CL:0002202!1.65e-07!9;CL:0002632!1.65e-07!9 | |ontology_enrichment_celltype=CL:0002368!2.30e-10!13;CL:0002202!1.65e-07!9;CL:0002632!1.65e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002328;9.52e-20;3!CL:0002202;1.02e-14;9!CL:0002632;1.02e-14;9!CL:0002368;2.24e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,5.37e-20,3;CL:0002202,8.67e-15,9;CL:0002632,8.67e-15,9;CL:0002368,2.00e-10,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.83e-14!57;UBERON:0005068!4.83e-14!57;UBERON:0006241!4.83e-14!57;UBERON:0007135!4.83e-14!57;UBERON:0002616!9.83e-11!59;UBERON:0002780!1.73e-10!41;UBERON:0001890!1.73e-10!41;UBERON:0006240!1.73e-10!41;UBERON:0003080!3.96e-10!42;UBERON:0000955!3.86e-09!69;UBERON:0006238!3.86e-09!69;UBERON:0002020!6.62e-09!34;UBERON:0003528!6.62e-09!34;UBERON:0001017!1.74e-08!82;UBERON:0002298!4.85e-08!8;UBERON:0002791!6.94e-08!33;UBERON:0003075!8.21e-08!86;UBERON:0007284!8.21e-08!86;UBERON:0005743!8.54e-08!86;UBERON:0001893!1.47e-07!34;UBERON:0002346!3.50e-07!90;UBERON:0002420!3.67e-07!9;UBERON:0007245!3.67e-07!9;UBERON:0010009!3.67e-07!9;UBERON:0010011!3.67e-07!9;UBERON:0000454!3.67e-07!9;UBERON:0002308!9.04e-07!9;UBERON:0000125!9.04e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;9.52e-20;3!UBERON:0002031;9.52e-20;3!UBERON:0002038;1.92e-15;1!UBERON:0009661;1.92e-15;1!UBERON:0002950;1.92e-15;1!UBERON:0001891;1.92e-15;1!UBERON:0002185;2.99e-12;5!UBERON:0007196;4.55e-09;15!UBERON:0001558;4.55e-09;15!UBERON:0000485;5.15e-09;7!UBERON:0001897;2.23e-08;2!UBERON:0010225;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.37e-20,3;UBERON:0002031,5.37e-20,3;UBERON:0002038,3.17e-15,1;UBERON:0009661,3.17e-15,1;UBERON:0002950,3.17e-15,1;UBERON:0001891,3.17e-15,1;UBERON:0009616,3.17e-15,1;UBERON:0010286,3.17e-15,1;UBERON:0002185,2.12e-12,5;UBERON:0007196,4.13e-09,15;UBERON:0001558,4.13e-09,15;UBERON:0001897,2.15e-08,2;UBERON:0010225,2.15e-08,2;UBERON:0000485,2.77e-07,9 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,1.83884244895785,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24803506515239,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,0.604780586659361,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67165076416218,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0.0787831823072236,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0.122026264901963,0.1251909307065,2.29363678276028,0.443716206147409,0.0620964029413835,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0.91064876540519,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0,0.588925401344836,1.48523200163543,0,0,0,0,0,0.178553938605658,0,0,0,0,1.00337708206016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.310298987585686,0,0,0,0,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.422863212287913,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,1.83884244895785,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24803506515239,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,0.604780586659361,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67165076416218,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0.0787831823072236,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0.122026264901963,0.1251909307065,2.29363678276028,0.443716206147409,0.0620964029413835,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0.91064876540519,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0,0.588925401344836,1.48523200163543,0,0,0,0,0,0.178553938605658,0,0,0,0,1.00337708206016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.310298987585686,0,0,0,0,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:110746992..110747011,- | |short_description=p@chr13:110746992..110747011,- | ||
}} | }} |
Latest revision as of 14:28, 24 July 2015
Short description: | p@chr13:110746992..110747011, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110746992..110747011, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 5.37e-20 | 3 |
epithelial cell of tracheobronchial tree | 8.67e-15 | 9 |
epithelial cell of lower respiratory tract | 8.67e-15 | 9 |
respiratory epithelial cell | 2.00e-10 | 13 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.37e-20 | 3 |
epithelium of bronchus | 5.37e-20 | 3 |
substantia nigra | 3.17e-15 | 1 |
midbrain nucleus | 3.17e-15 | 1 |
regional part of midbrain | 3.17e-15 | 1 |
midbrain | 3.17e-15 | 1 |
presumptive midbrain | 3.17e-15 | 1 |
midbrain neural tube | 3.17e-15 | 1 |
bronchus | 2.12e-12 | 5 |
tracheobronchial tree | 4.13e-09 | 15 |
lower respiratory tract | 4.13e-09 | 15 |
dorsal plus ventral thalamus | 2.15e-08 | 2 |
thalamic complex | 2.15e-08 | 2 |
simple columnar epithelium | 2.77e-07 | 9 |