FFCP PHASE1:Hg19::chr13:114487620..114487623,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114487620..114487623,- | |||
|coexpression_cluster_id=C461 | |||
|description=CAGE_peak_at_chr13:114487620..114487623,- | |description=CAGE_peak_at_chr13:114487620..114487623,- | ||
|id=chr13:114487620..114487623,- | |id=chr13:114487620..114487623,- | ||
|ontology_enrichment_celltype=CL:0000243!1.47e-08!15;CL:0000125!1.47e-08!15;CL:0000030!1.47e-08!15;CL:0000339!1.47e-08!15;CL:0000095!1.49e-07!17;CL:0000123!1.49e-07!17;CL:0000066!2.08e-07!254 | |ontology_enrichment_celltype=CL:0000243!1.47e-08!15;CL:0000125!1.47e-08!15;CL:0000030!1.47e-08!15;CL:0000339!1.47e-08!15;CL:0000095!1.49e-07!17;CL:0000123!1.49e-07!17;CL:0000066!2.08e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1001319;4.66e-21;1!CL:1000600;4.66e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.30e-21,1;CL:1000600,2.30e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2!UBERON:0009847;6.56e-08;3!UBERON:0003353;6.56e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!3.90e-11!14;DOID:305!6.89e-11!106;DOID:14566!1.31e-10!239;DOID:0050687!3.41e-10!143;DOID:162!2.26e-09!235 | |ontology_enrichment_disease=DOID:1749!3.90e-11!14;DOID:305!6.89e-11!106;DOID:14566!1.31e-10!239;DOID:0050687!3.41e-10!143;DOID:162!2.26e-09!235 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.82e-13;14!DOID:4929;3.18e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.67e-13,14;DOID:4929,2.73e-11,2;DOID:305,5.67e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.07e-16!12;UBERON:0003343!1.35e-13!4;UBERON:0004785!1.35e-13!4;UBERON:0003729!6.91e-11!5;UBERON:0002394!4.18e-08!4;UBERON:0003928!4.18e-08!4;UBERON:0002294!5.70e-08!7;UBERON:0001173!5.70e-08!7;UBERON:0004912!5.70e-08!7;UBERON:0000058!7.98e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;4.66e-21;1!UBERON:0004913;4.66e-21;1!UBERON:0003703;4.66e-21;1!UBERON:0001256;4.66e-21;1!UBERON:0001259;4.66e-21;1!UBERON:0001174;4.66e-21;1!UBERON:0004914;4.66e-21;1!UBERON:0001255;3.18e-11;2!UBERON:0001556;3.18e-11;2!UBERON:0001723;4.52e-08;3!UBERON:0001033;4.52e-08;3!UBERON:0002114;6.56e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.30e-21,1;UBERON:0001256,2.30e-21,1;UBERON:0001259,2.30e-21,1;UBERON:0004913,3.45e-21,1;UBERON:0003703,3.45e-21,1;UBERON:0001174,3.45e-21,1;UBERON:0004914,3.45e-21,1;UBERON:0001255,2.23e-11,2;UBERON:0001556,2.23e-11,2;UBERON:0001723,4.52e-08,3;UBERON:0001033,4.52e-08,3;UBERON:0010056,4.52e-08,3;UBERON:0002114,5.93e-08,2 | |||
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| ||
|short_description=p@chr13:114487620..114487623,- | |short_description=p@chr13:114487620..114487623,- | ||
}} | }} |
Latest revision as of 14:50, 24 July 2015
Short description: | p@chr13:114487620..114487623, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114487620..114487623, - |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.30e-21 | 1 |
lower urinary tract cell | 2.30e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.30e-21 | 1 |
wall of urinary bladder | 2.30e-21 | 1 |
mucosa of urinary bladder | 2.30e-21 | 1 |
hepatopancreatic ampulla | 3.45e-21 | 1 |
extrahepatic bile duct | 3.45e-21 | 1 |
common bile duct | 3.45e-21 | 1 |
duodenal papilla | 3.45e-21 | 1 |
urinary bladder | 2.23e-11 | 2 |
lower urinary tract | 2.23e-11 | 2 |
tongue | 4.52e-08 | 3 |
gustatory system | 4.52e-08 | 3 |
future tongue | 4.52e-08 | 3 |
duodenum | 5.93e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.67e-13 | 14 |
tubular adenocarcinoma | 2.73e-11 | 2 |
carcinoma | 5.67e-09 | 106 |