FFCP PHASE1:Hg19::chr13:54908893..54908895,+: Difference between revisions
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|id=chr13:54908893..54908895,+
|short_description=p@chr13:54908893..54908895,+
|description=CAGE_peak_at_chr13:54908893..54908895,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:54908893..54908895,+ | |||
|coexpression_cluster_id=C417 | |||
|description=CAGE_peak_at_chr13:54908893..54908895,+ | |||
|id=chr13:54908893..54908895,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.24e-38!5;CL:0000039!2.69e-18!7;CL:0000586!2.69e-18!7;CL:0000047!4.03e-16!8;CL:0000540!1.02e-12!6;CL:0000031!1.02e-12!6;CL:0000404!1.02e-12!6;CL:0000148!1.43e-07!10;CL:0000541!1.43e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.51e-34;6!CL:0000404;7.51e-34;6!CL:0000039;1.39e-28;7!CL:0000586;1.39e-28;7!CL:0002319;4.54e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.51e-34,6;CL:0000031,7.51e-34,6;CL:0000404,7.51e-34,6;CL:0000039,1.21e-28,7;CL:0000586,1.21e-28,7;CL:0000047,1.32e-25,8;CL:0002319,4.54e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000031;7.51e-34;6!UBERON:0009117;2.94e-20;10!UBERON:0005564;2.94e-20;10 | |||
|ontology_enrichment_disease=DOID:3095!2.44e-12!22;DOID:2994!2.44e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.69e-16;22!DOID:2994;2.69e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.53e-16,22;DOID:2994,2.53e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.89e-16!8;UBERON:0003135!1.03e-11!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.07e-25;8!UBERON:0003135;1.73e-18;11!UBERON:0000991;5.11e-10;21!UBERON:0003101;1.36e-09;22!UBERON:0000079;1.36e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.59e-25,8;UBERON:0003135,1.58e-18,11;UBERON:0000991,4.88e-10,21;UBERON:0009196,4.88e-10,21;UBERON:0009117,4.88e-10,21;UBERON:0005564,4.88e-10,21;UBERON:0004176,1.30e-09,22;UBERON:0003101,1.30e-09,22;UBERON:0000079,1.30e-09,22 | |||
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|short_description=p@chr13:54908893..54908895,+ | |||
}} | }} |
Latest revision as of 16:51, 24 July 2015
Short description: | p@chr13:54908893..54908895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:54908893..54908895, + |
Coexpression cluster: | C417_HES3GFP_iPS_teratocarcinoma_H9_testicular_prostate_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.51e-34 | 6 |
neuroblast | 7.51e-34 | 6 |
electrically signaling cell | 7.51e-34 | 6 |
germ line cell | 1.21e-28 | 7 |
germ cell | 1.21e-28 | 7 |
neuronal stem cell | 1.32e-25 | 8 |
neural cell | 4.54e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 3.59e-25 | 8 |
male reproductive organ | 1.58e-18 | 11 |
gonad | 4.88e-10 | 21 |
indifferent external genitalia | 4.88e-10 | 21 |
indifferent gonad | 4.88e-10 | 21 |
gonad primordium | 4.88e-10 | 21 |
external genitalia | 1.30e-09 | 22 |
male organism | 1.30e-09 | 22 |
male reproductive system | 1.30e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.53e-16 | 22 |
germ cell cancer | 2.53e-16 | 22 |