FFCP PHASE1:Hg19::chr14:104202639..104202646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:104202639..104202646,- | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr14:104202639..104202646,- | |description=CAGE_peak_at_chr14:104202639..104202646,- | ||
|id=chr14:104202639..104202646,- | |id=chr14:104202639..104202646,- | ||
|ontology_enrichment_celltype=CL:0000349!1.17e-31!3;CL:0002577!1.17e-31!3;CL:0002536!1.88e-21!2;CL:0002537!4.15e-09!5 | |ontology_enrichment_celltype=CL:0000349!1.17e-31!3;CL:0002577!1.17e-31!3;CL:0002536!1.88e-21!2;CL:0002537!4.15e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002577;2.28e-85;3!CL:0000349;1.97e-72;19!CL:0002536;1.13e-56;2!CL:0002537;2.02e-23;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.28e-85,3;CL:0000349,1.97e-72,19;CL:0002536,8.47e-57,2;CL:0002537,2.27e-23,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.08e-57!14;UBERON:0000158!2.08e-57!14;UBERON:0001987!5.71e-41!4;UBERON:0004340!5.71e-41!4;UBERON:0003124!4.10e-36!7;UBERON:0000478!4.64e-33!24;UBERON:0000305!1.42e-23!7;UBERON:0004871!1.15e-20!8;UBERON:0004923!2.97e-13!57;UBERON:0000995!5.94e-12!21;UBERON:0007029!1.78e-11!1;UBERON:0005795!2.10e-11!22;UBERON:0003975!2.10e-11!22;UBERON:0002902!4.91e-11!1;UBERON:0009899!4.91e-11!1;UBERON:0001882!5.43e-11!1;UBERON:0005403!5.43e-11!1;UBERON:0004175!5.08e-10!25;UBERON:0000064!6.83e-08!219;UBERON:0001044!1.25e-07!6;UBERON:0003293!1.25e-07!6;UBERON:0003294!1.25e-07!6;UBERON:0010047!1.25e-07!6;UBERON:0000167!1.25e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.61e-64;4!UBERON:0000305;4.15e-64;7!UBERON:0000478;1.82e-57;24!UBERON:0005631;3.94e-45;10!UBERON:0000158;3.94e-45;10!UBERON:0000077;3.06e-10;27!UBERON:0004923;2.79e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.60e-98,14;UBERON:0000158,4.60e-98,14;UBERON:0001987,2.61e-64,4;UBERON:0004340,2.61e-64,4;UBERON:0000305,4.15e-64,7;UBERON:0000478,1.82e-57,24;UBERON:0004871,3.32e-56,8;UBERON:0003124,3.40e-37,7;UBERON:0004923,3.53e-21,66;UBERON:0000995,5.82e-13,21;UBERON:0005795,2.09e-12,22;UBERON:0003975,2.09e-12,22;UBERON:0004175,5.28e-11,25;UBERON:0000077,1.39e-09,29;UBERON:0003134,1.19e-07,37;UBERON:0000474,1.19e-07,37;UBERON:0003081,5.76e-07,203;UBERON:0003100,5.78e-07,41 | |||
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|short_description=p@chr14:104202639..104202646,- | |short_description=p@chr14:104202639..104202646,- | ||
}} | }} |
Latest revision as of 18:22, 24 July 2015
Short description: | p@chr14:104202639..104202646, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:104202639..104202646, - |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.28e-85 | 3 |
extraembryonic cell | 1.97e-72 | 19 |
amniotic epithelial cell | 8.47e-57 | 2 |
amnion mesenchymal stem cell | 2.27e-23 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.60e-98 | 14 |
membranous layer | 4.60e-98 | 14 |
placenta | 2.61e-64 | 4 |
allantois | 2.61e-64 | 4 |
amnion | 4.15e-64 | 7 |
extraembryonic structure | 1.82e-57 | 24 |
somatic layer of lateral plate mesoderm | 3.32e-56 | 8 |
chorion | 3.40e-37 | 7 |
organ component layer | 3.53e-21 | 66 |
uterus | 5.82e-13 | 21 |
embryonic uterus | 2.09e-12 | 22 |
internal female genitalia | 2.09e-12 | 22 |
internal genitalia | 5.28e-11 | 25 |
mixed endoderm/mesoderm-derived structure | 1.39e-09 | 29 |
female reproductive organ | 1.19e-07 | 37 |
female reproductive system | 1.19e-07 | 37 |
lateral plate mesoderm | 5.76e-07 | 203 |
female organism | 5.78e-07 | 41 |