FFCP PHASE1:Hg19::chr14:104202647..104202662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:104202647..104202662,- | |||
|coexpression_cluster_id=C360 | |coexpression_cluster_id=C360 | ||
|description=CAGE_peak_at_chr14:104202647..104202662,- | |description=CAGE_peak_at_chr14:104202647..104202662,- | ||
|id=chr14:104202647..104202662,- | |id=chr14:104202647..104202662,- | ||
|ontology_enrichment_celltype=CL:0000349!1.24e-14!3;CL:0002577!1.24e-14!3;CL:0002536!3.27e-10!2;CL:0002537!7.91e-09!5;CL:0002541!7.11e-07!3 | |ontology_enrichment_celltype=CL:0000349!1.24e-14!3;CL:0002577!1.24e-14!3;CL:0002536!3.27e-10!2;CL:0002537!7.91e-09!5;CL:0002541!7.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.17e-57;19!CL:0002577;9.90e-35;3!CL:0002536;1.78e-23;2!CL:0002537;8.35e-21;5!CL:0002541;1.53e-15;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.17e-57,19;CL:0002577,9.90e-35,3;CL:0002536,1.78e-23,2;CL:0002537,7.81e-21,5;CL:0002541,1.65e-15,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.57e-12;1!UBERON:0006298;2.75e-12;1 | |||
|ontology_enrichment_disease=DOID:5093!4.93e-10!4;DOID:1612!4.93e-10!4 | |ontology_enrichment_disease=DOID:5093!4.93e-10!4;DOID:1612!4.93e-10!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.10e-37!14;UBERON:0000158!4.10e-37!14;UBERON:0003124!8.72e-23!7;UBERON:0000478!1.21e-20!24;UBERON:0001987!1.62e-18!4;UBERON:0004340!1.62e-18!4;UBERON:0001044!2.68e-18!6;UBERON:0003293!2.68e-18!6;UBERON:0003294!2.68e-18!6;UBERON:0010047!2.68e-18!6;UBERON:0000167!2.68e-18!6;UBERON:0000305!2.85e-16!7;UBERON:0004871!3.39e-14!8;UBERON:0000078!6.59e-11!18;UBERON:0003408!7.35e-11!10;UBERON:0001829!4.87e-10!2;UBERON:0000166!3.30e-09!21;UBERON:0002148!5.81e-09!2;UBERON:0009662!5.81e-09!2;UBERON:0004923!9.00e-09!57;UBERON:0000476!7.11e-07!3;UBERON:0000920!7.11e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!4.10e-37!14;UBERON:0000158!4.10e-37!14;UBERON:0003124!8.72e-23!7;UBERON:0000478!1.21e-20!24;UBERON:0001987!1.62e-18!4;UBERON:0004340!1.62e-18!4;UBERON:0001044!2.68e-18!6;UBERON:0003293!2.68e-18!6;UBERON:0003294!2.68e-18!6;UBERON:0010047!2.68e-18!6;UBERON:0000167!2.68e-18!6;UBERON:0000305!2.85e-16!7;UBERON:0004871!3.39e-14!8;UBERON:0000078!6.59e-11!18;UBERON:0003408!7.35e-11!10;UBERON:0001829!4.87e-10!2;UBERON:0000166!3.30e-09!21;UBERON:0002148!5.81e-09!2;UBERON:0009662!5.81e-09!2;UBERON:0004923!9.00e-09!57;UBERON:0000476!7.11e-07!3;UBERON:0000920!7.11e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.13e-53;10!UBERON:0000158;1.13e-53;10!UBERON:0000478;3.32e-45;24!UBERON:0000305;6.39e-40;7!UBERON:0001044;1.44e-29;6!UBERON:0003293;1.44e-29;6!UBERON:0003294;1.44e-29;6!UBERON:0010047;1.44e-29;6!UBERON:0003408;1.44e-29;6!UBERON:0000167;1.44e-29;6!UBERON:0001987;3.10e-26;4!UBERON:0001829;4.89e-23;2!UBERON:0003124;1.53e-15;3!UBERON:0000920;1.53e-15;3!UBERON:0001041;7.42e-13;14!UBERON:0001831;1.57e-12;1!UBERON:0001567;1.57e-12;1!UBERON:0005795;2.75e-12;1!UBERON:0001736;2.75e-12;1!UBERON:0001301;4.31e-12;1!UBERON:0000161;1.56e-09;19!UBERON:0000166;1.56e-09;19!UBERON:0004923;5.68e-07;55!UBERON:0004089;6.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.93e-78,14;UBERON:0000158,2.93e-78,14;UBERON:0000478,3.32e-45,24;UBERON:0000305,5.90e-40,7;UBERON:0003124,8.81e-40,7;UBERON:0004871,5.62e-35,8;UBERON:0001044,1.24e-29,6;UBERON:0003293,1.24e-29,6;UBERON:0003294,1.24e-29,6;UBERON:0010047,1.24e-29,6;UBERON:0000167,1.24e-29,6;UBERON:0001987,3.10e-26,4;UBERON:0004340,3.10e-26,4;UBERON:0001829,4.89e-23,2;UBERON:0003408,6.35e-18,10;UBERON:0004923,1.18e-15,66;UBERON:0000920,1.65e-15,3;UBERON:0001831,1.57e-12,1;UBERON:0001567,1.57e-12,1;UBERON:0008801,1.57e-12,1;UBERON:0001736,2.75e-12,1;UBERON:0006298,2.75e-12,1;UBERON:0001301,3.85e-12,1;UBERON:0005795,1.99e-08,22;UBERON:0000166,2.83e-08,22;UBERON:0004175,1.99e-07,25;UBERON:0004089,6.80e-07,2 | |||
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| ||
|short_description=p@chr14:104202647..104202662,- | |short_description=p@chr14:104202647..104202662,- | ||
}} | }} |
Latest revision as of 18:22, 24 July 2015
Short description: | p@chr14:104202647..104202662, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:104202647..104202662, - |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.17e-57 | 19 |
placental epithelial cell | 9.90e-35 | 3 |
amniotic epithelial cell | 1.78e-23 | 2 |
amnion mesenchymal stem cell | 7.81e-21 | 5 |
chorionic membrane mesenchymal stem cell | 1.65e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.93e-78 | 14 |
membranous layer | 2.93e-78 | 14 |
extraembryonic structure | 3.32e-45 | 24 |
amnion | 5.90e-40 | 7 |
chorion | 8.81e-40 | 7 |
somatic layer of lateral plate mesoderm | 5.62e-35 | 8 |
saliva-secreting gland | 1.24e-29 | 6 |
gland of oral region | 1.24e-29 | 6 |
gland of foregut | 1.24e-29 | 6 |
oral gland | 1.24e-29 | 6 |
oral cavity | 1.24e-29 | 6 |
placenta | 3.10e-26 | 4 |
allantois | 3.10e-26 | 4 |
major salivary gland | 4.89e-23 | 2 |
gland of gut | 6.35e-18 | 10 |
organ component layer | 1.18e-15 | 66 |
egg chorion | 1.65e-15 | 3 |
parotid gland | 1.57e-12 | 1 |
cheek | 1.57e-12 | 1 |
parotid gland primordium | 1.57e-12 | 1 |
submandibular gland | 2.75e-12 | 1 |
submandibular gland primordium | 2.75e-12 | 1 |
epididymis | 3.85e-12 | 1 |
embryonic uterus | 1.99e-08 | 22 |
oral opening | 2.83e-08 | 22 |
internal genitalia | 1.99e-07 | 25 |
midface | 6.80e-07 | 2 |