FFCP PHASE1:Hg19::chr14:29236997..29237007,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2290 | |EntrezGene=entrezgene:2290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=3811 | |HGNC=HGNC:3811 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=P55316 | |UniProt=uniprot:P55316 | ||
|association_with_transcript=67bp_to_X74144_5end | |association_with_transcript=67bp_to_X74144_5end | ||
|cluster_id=chr14:29236997..29237007,+ | |||
|coexpression_cluster_id=C3421 | |coexpression_cluster_id=C3421 | ||
|description=CAGE_peak_11_at_FOXG1_5end | |description=CAGE_peak_11_at_FOXG1_5end | ||
Revision as of 20:03, 24 July 2015
| Short description: | p11@FOXG1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_FOXG1_5end |
| Coexpression cluster: | C3421_Neural_caudate_medulloblastoma_Neurons_small_Astrocyte_putamen |
| Association with transcript: | 67bp_to_X74144_5end |
| EntrezGene: | 2290 |
| HGNC: | 3811 |
| UniProt: | P55316 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p11@FOXG1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 5.57e-27 | 8 |
| neuron | 1.33e-20 | 6 |
| neuroblast | 1.33e-20 | 6 |
| electrically signaling cell | 1.33e-20 | 6 |
| neural cell | 1.88e-17 | 25 |
| neurectodermal cell | 1.49e-07 | 59 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 1.72e-25 | 81 |
| nervous system | 7.26e-23 | 89 |
| regional part of telencephalon | 5.65e-19 | 32 |
| cerebral hemisphere | 5.65e-19 | 32 |
| cerebral cortex | 5.99e-18 | 25 |
| pallium | 5.99e-18 | 25 |
| brain grey matter | 7.29e-18 | 34 |
| gray matter | 7.29e-18 | 34 |
| telencephalon | 7.29e-18 | 34 |
| neocortex | 9.82e-16 | 20 |
Showing 1 to 10 of 37 entries
