FFCP PHASE1:Hg19::chr14:62394403..62394453,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:62394403..62394453,+ | |||
|coexpression_cluster_id=C1729 | |coexpression_cluster_id=C1729 | ||
|description=CAGE_peak_at_chr14:62394403..62394453,+ | |description=CAGE_peak_at_chr14:62394403..62394453,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!7.30e-12!254;CL:0002537!3.07e-08!5;CL:0000197!4.07e-07!6;CL:0000098!4.07e-07!6;CL:0002167!4.07e-07!6 | |ontology_enrichment_celltype=CL:0000066!7.30e-12!254;CL:0002537!3.07e-08!5;CL:0000197!4.07e-07!6;CL:0000098!4.07e-07!6;CL:0002167!4.07e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000349;9.13e-27;19!CL:0002537;2.19e-17;5!CL:0002541;3.02e-11;3!CL:1000415;2.02e-07;2!CL:0002536;2.86e-07;2 | |ontology_enrichment_celltype_v019=CL:0000349;9.13e-27;19!CL:0002537;2.19e-17;5!CL:0002541;3.02e-11;3!CL:1000415;2.02e-07;2!CL:0002536;2.86e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.29e-27,19;CL:0002537,2.17e-17,5;CL:0002541,2.98e-11,3;CL:0000066,5.93e-08,253;CL:1000415,1.84e-07,2;CL:0002536,4.60e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.38e-09!143;DOID:305!1.62e-09!106;DOID:1749!4.89e-09!14 | |ontology_enrichment_disease=DOID:0050687!1.38e-09!143;DOID:305!1.62e-09!106;DOID:1749!4.89e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.57e-17;14!DOID:1324;4.27e-07;15 | |ontology_enrichment_disease_v019=DOID:1749;1.57e-17;14!DOID:1324;4.27e-07;15 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.17e-17,14;DOID:0050687,2.19e-11,143;DOID:305,2.86e-11,106;DOID:1324,3.93e-07,15;DOID:162,4.14e-07,235;DOID:14566,8.33e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.61e-19!14;UBERON:0000158!4.61e-19!14;UBERON:0000478!1.27e-10!24;UBERON:0000305!1.72e-10!7;UBERON:0003124!3.23e-10!7;UBERON:0004871!6.02e-09!8;UBERON:0004923!3.72e-08!57;UBERON:0004119!4.22e-08!169;UBERON:0000925!4.22e-08!169;UBERON:0006595!4.22e-08!169;UBERON:0005911!8.80e-08!82 | |ontology_enrichment_uberon=UBERON:0005631!4.61e-19!14;UBERON:0000158!4.61e-19!14;UBERON:0000478!1.27e-10!24;UBERON:0000305!1.72e-10!7;UBERON:0003124!3.23e-10!7;UBERON:0004871!6.02e-09!8;UBERON:0004923!3.72e-08!57;UBERON:0004119!4.22e-08!169;UBERON:0000925!4.22e-08!169;UBERON:0006595!4.22e-08!169;UBERON:0005911!8.80e-08!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.84e-32;10!UBERON:0000158;1.84e-32;10!UBERON:0000478;5.84e-24;24!UBERON:0000305;6.15e-23;7!UBERON:0003124;3.02e-11;3!UBERON:0000920;3.02e-11;3!UBERON:0001987;8.16e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.84e-32;10!UBERON:0000158;1.84e-32;10!UBERON:0000478;5.84e-24;24!UBERON:0000305;6.15e-23;7!UBERON:0003124;3.02e-11;3!UBERON:0000920;3.02e-11;3!UBERON:0001987;8.16e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.56e-38,14;UBERON:0000158,6.56e-38,14;UBERON:0000478,5.39e-24,24;UBERON:0000305,9.92e-23,7;UBERON:0004871,9.49e-20,8;UBERON:0003124,4.78e-17,7;UBERON:0004923,1.22e-11,66;UBERON:0000920,2.98e-11,3;UBERON:0001987,5.75e-08,4;UBERON:0004340,5.75e-08,4 | |||
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| ||
|short_description=p@chr14:62394403..62394453,+ | |short_description=p@chr14:62394403..62394453,+ | ||
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Latest revision as of 21:45, 24 July 2015
Short description: | p@chr14:62394403..62394453, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:62394403..62394453, + |
Coexpression cluster: | C1729_prostate_osteosarcoma_large_choriocarcinoma_chorionic_amniotic_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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extraembryonic cell | 8.29e-27 | 19 |
amnion mesenchymal stem cell | 2.17e-17 | 5 |
chorionic membrane mesenchymal stem cell | 2.98e-11 | 3 |
epithelial cell | 5.93e-08 | 253 |
epithelial cell of gall bladder | 1.84e-07 | 2 |
amniotic epithelial cell | 4.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.56e-38 | 14 |
membranous layer | 6.56e-38 | 14 |
extraembryonic structure | 5.39e-24 | 24 |
amnion | 9.92e-23 | 7 |
somatic layer of lateral plate mesoderm | 9.49e-20 | 8 |
chorion | 4.78e-17 | 7 |
organ component layer | 1.22e-11 | 66 |
egg chorion | 2.98e-11 | 3 |
placenta | 5.75e-08 | 4 |
allantois | 5.75e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.17e-17 | 14 |
cell type cancer | 2.19e-11 | 143 |
carcinoma | 2.86e-11 | 106 |
lung cancer | 3.93e-07 | 15 |
cancer | 4.14e-07 | 235 |
disease of cellular proliferation | 8.33e-07 | 239 |