FFCP PHASE1:Hg19::chr14:75034613..75034644,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:75034613..75034644,- | |||
|description=CAGE_peak_at_chr14:75034613..75034644,- | |description=CAGE_peak_at_chr14:75034613..75034644,- | ||
|id=chr14:75034613..75034644,- | |id=chr14:75034613..75034644,- | ||
|ontology_enrichment_celltype=CL:0002076!1.17e-26!43;CL:0002368!1.79e-21!13;CL:0000223!2.52e-18!59;CL:0002623!6.43e-15!3;CL:0002251!1.27e-12!21;CL:0000240!2.82e-12!6;CL:0000311!2.82e-12!6;CL:0000079!2.82e-12!6;CL:0000237!2.82e-12!6;CL:0000036!2.82e-12!6;CL:0000357!2.82e-12!6;CL:0000114!2.82e-12!6;CL:0002159!4.86e-12!13;CL:0002327!1.57e-10!4;CL:0000066!3.60e-09!254;CL:0000622!4.03e-09!5;CL:0000312!6.18e-09!5;CL:0002202!2.11e-08!9;CL:0002632!2.11e-08!9;CL:0000154!1.16e-07!6;CL:0002077!1.39e-07!33;CL:0002328!3.11e-07!3;CL:0000068!5.33e-07!3;CL:0000069!5.33e-07!3;CL:0000307!5.33e-07!3;CL:0000377!5.33e-07!3;CL:0002166!7.17e-07!3;CL:0002621!9.06e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.17e-26!43;CL:0002368!1.79e-21!13;CL:0000223!2.52e-18!59;CL:0002623!6.43e-15!3;CL:0002251!1.27e-12!21;CL:0000240!2.82e-12!6;CL:0000311!2.82e-12!6;CL:0000079!2.82e-12!6;CL:0000237!2.82e-12!6;CL:0000036!2.82e-12!6;CL:0000357!2.82e-12!6;CL:0000114!2.82e-12!6;CL:0002159!4.86e-12!13;CL:0002327!1.57e-10!4;CL:0000066!3.60e-09!254;CL:0000622!4.03e-09!5;CL:0000312!6.18e-09!5;CL:0002202!2.11e-08!9;CL:0002632!2.11e-08!9;CL:0000154!1.16e-07!6;CL:0002077!1.39e-07!33;CL:0002328!3.11e-07!3;CL:0000068!5.33e-07!3;CL:0000069!5.33e-07!3;CL:0000307!5.33e-07!3;CL:0000377!5.33e-07!3;CL:0002166!7.17e-07!3;CL:0002621!9.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;4.17e-29;13!CL:0002623;7.68e-22;3!CL:0002328;4.45e-21;3!CL:0002076;8.51e-18;42!CL:0002202;9.99e-16;9!CL:0002632;9.99e-16;9!CL:0000622;1.63e-13;5!CL:0000312;2.37e-13;5!CL:0000154;2.02e-11;6!CL:0000240;2.76e-11;6!CL:0000311;2.76e-11;6!CL:0000079;2.76e-11;6!CL:0000237;2.76e-11;6!CL:0000150;6.55e-08;9!CL:0000362;8.03e-08;9!CL:0002251;1.28e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.55e-29,13;CL:0002076,1.21e-22,42;CL:0002623,7.68e-22,3;CL:0002328,3.28e-21,3;CL:0000223,3.03e-16,58;CL:0002202,1.00e-15,9;CL:0002632,1.00e-15,9;CL:0000622,1.63e-13,5;CL:0000312,2.23e-13,5;CL:0000154,2.02e-11,6;CL:0000240,2.62e-11,6;CL:0000311,2.62e-11,6;CL:0000079,2.62e-11,6;CL:0000237,2.62e-11,6;CL:0000036,2.62e-11,6;CL:0000357,2.62e-11,6;CL:0000114,2.62e-11,6;CL:0000066,4.34e-09,253;CL:0000150,6.55e-08,9;CL:0000362,7.77e-08,9;CL:0002251,1.32e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000357;2.76e-11;6!CL:0000114;2.76e-11;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.30e-14!72;UBERON:0007196!4.37e-11!14;UBERON:0001558!4.37e-11!14;UBERON:0001911!1.57e-10!4;UBERON:0005333!1.57e-10!4;UBERON:0008425!1.57e-10!4;UBERON:0005311!1.57e-10!4;UBERON:0003126!2.49e-10!7;UBERON:0001005!2.49e-10!7;UBERON:0000166!1.02e-09!21;UBERON:0003127!1.28e-09!2;UBERON:0004119!1.74e-09!169;UBERON:0000925!1.74e-09!169;UBERON:0006595!1.74e-09!169;UBERON:0000165!4.88e-09!28;UBERON:0000930!4.88e-09!28;UBERON:0000161!8.15e-09!35;UBERON:0000065!4.55e-08!53;UBERON:0001044!1.16e-07!6;UBERON:0003293!1.16e-07!6;UBERON:0003294!1.16e-07!6;UBERON:0010047!1.16e-07!6;UBERON:0000167!1.16e-07!6;UBERON:0005631!1.48e-07!14;UBERON:0000158!1.48e-07!14;UBERON:0004815!3.11e-07!3;UBERON:0002031!3.11e-07!3;UBERON:0004121!3.15e-07!169;UBERON:0005178!3.49e-07!34;UBERON:0002224!3.49e-07!34;UBERON:0000924!5.86e-07!173;UBERON:0006601!5.86e-07!173;UBERON:0005181!6.08e-07!35;UBERON:0001949!9.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.45e-21;3!UBERON:0002031;4.45e-21;3!UBERON:0002185;4.66e-13;5!UBERON:0001044;2.02e-11;6!UBERON:0003293;2.02e-11;6!UBERON:0003294;2.02e-11;6!UBERON:0010047;2.02e-11;6!UBERON:0003408;2.02e-11;6!UBERON:0000167;2.02e-11;6!UBERON:0007196;1.10e-09;15!UBERON:0001558;1.10e-09;15!UBERON:0000485;1.35e-09;7!UBERON:0000161;5.41e-08;19!UBERON:0000166;5.41e-08;19!UBERON:0000065;1.63e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.28e-21,3;UBERON:0002031,3.28e-21,3;UBERON:0002185,3.88e-13,5;UBERON:0001004,1.34e-12,74;UBERON:0001044,2.02e-11,6;UBERON:0003293,2.02e-11,6;UBERON:0003294,2.02e-11,6;UBERON:0010047,2.02e-11,6;UBERON:0000167,2.02e-11,6;UBERON:0007196,1.10e-09,15;UBERON:0001558,1.10e-09,15;UBERON:0000485,1.05e-07,9;UBERON:0003408,3.33e-07,10;UBERON:0000065,5.00e-07,54;UBERON:0000166,5.85e-07,22;UBERON:0004119,7.31e-07,160;UBERON:0000925,7.31e-07,160;UBERON:0006595,7.31e-07,160 | |||
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| ||
|short_description=p@chr14:75034613..75034644,- | |short_description=p@chr14:75034613..75034644,- | ||
}} | }} |
Latest revision as of 22:42, 24 July 2015
Short description: | p@chr14:75034613..75034644, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75034613..75034644, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.55e-29 | 13 |
endo-epithelial cell | 1.21e-22 | 42 |
acinar cell of salivary gland | 7.68e-22 | 3 |
bronchial epithelial cell | 3.28e-21 | 3 |
endodermal cell | 3.03e-16 | 58 |
epithelial cell of tracheobronchial tree | 1.00e-15 | 9 |
epithelial cell of lower respiratory tract | 1.00e-15 | 9 |
acinar cell | 1.63e-13 | 5 |
keratinocyte | 2.23e-13 | 5 |
protein secreting cell | 2.02e-11 | 6 |
stratified squamous epithelial cell | 2.62e-11 | 6 |
keratin accumulating cell | 2.62e-11 | 6 |
stratified epithelial cell | 2.62e-11 | 6 |
keratinizing barrier epithelial cell | 2.62e-11 | 6 |
epithelial fate stem cell | 2.62e-11 | 6 |
stratified epithelial stem cell | 2.62e-11 | 6 |
surface ectodermal cell | 2.62e-11 | 6 |
epithelial cell | 4.34e-09 | 253 |
glandular epithelial cell | 6.55e-08 | 9 |
epidermal cell | 7.77e-08 | 9 |
epithelial cell of alimentary canal | 1.32e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.28e-21 | 3 |
epithelium of bronchus | 3.28e-21 | 3 |
bronchus | 3.88e-13 | 5 |
respiratory system | 1.34e-12 | 74 |
saliva-secreting gland | 2.02e-11 | 6 |
gland of oral region | 2.02e-11 | 6 |
gland of foregut | 2.02e-11 | 6 |
oral gland | 2.02e-11 | 6 |
oral cavity | 2.02e-11 | 6 |
tracheobronchial tree | 1.10e-09 | 15 |
lower respiratory tract | 1.10e-09 | 15 |
simple columnar epithelium | 1.05e-07 | 9 |
gland of gut | 3.33e-07 | 10 |
respiratory tract | 5.00e-07 | 54 |
oral opening | 5.85e-07 | 22 |
endoderm-derived structure | 7.31e-07 | 160 |
endoderm | 7.31e-07 | 160 |
presumptive endoderm | 7.31e-07 | 160 |