FFCP PHASE1:Hg19::chr15:22550731..22550738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:22550731..22550738,+ | |||
|coexpression_cluster_id=C3474 | |||
|description=CAGE_peak_at_chr15:22550731..22550738,+ | |description=CAGE_peak_at_chr15:22550731..22550738,+ | ||
|id=chr15:22550731..22550738,+ | |id=chr15:22550731..22550738,+ | ||
|ontology_enrichment_celltype=CL:0002393!1.41e-47!9;CL:0002397!1.41e-47!9;CL:0002057!3.88e-38!42;CL:0000860!2.20e-35!45;CL:0002194!3.31e-27!63;CL:0000576!3.31e-27!63;CL:0000040!3.31e-27!63;CL:0000559!3.31e-27!63;CL:0002009!2.80e-26!65;CL:0002087!3.02e-25!119;CL:0000766!6.72e-25!76;CL:0000839!3.44e-24!70;CL:0000557!8.30e-24!71;CL:0000738!5.94e-23!140;CL:0000875!6.92e-22!3;CL:0002396!6.92e-22!3;CL:0002031!1.25e-19!124;CL:0000037!7.21e-18!172;CL:0000566!7.21e-18!172;CL:0000988!1.21e-16!182;CL:0000763!8.07e-16!112;CL:0000049!8.07e-16!112;CL:0002032!2.37e-15!165;CL:0000837!2.37e-15!165;CL:0000842!8.21e-10!3;CL:0000224!1.44e-07!4 | |ontology_enrichment_celltype=CL:0002393!1.41e-47!9;CL:0002397!1.41e-47!9;CL:0002057!3.88e-38!42;CL:0000860!2.20e-35!45;CL:0002194!3.31e-27!63;CL:0000576!3.31e-27!63;CL:0000040!3.31e-27!63;CL:0000559!3.31e-27!63;CL:0002009!2.80e-26!65;CL:0002087!3.02e-25!119;CL:0000766!6.72e-25!76;CL:0000839!3.44e-24!70;CL:0000557!8.30e-24!71;CL:0000738!5.94e-23!140;CL:0000875!6.92e-22!3;CL:0002396!6.92e-22!3;CL:0002031!1.25e-19!124;CL:0000037!7.21e-18!172;CL:0000566!7.21e-18!172;CL:0000988!1.21e-16!182;CL:0000763!8.07e-16!112;CL:0000049!8.07e-16!112;CL:0002032!2.37e-15!165;CL:0000837!2.37e-15!165;CL:0000842!8.21e-10!3;CL:0000224!1.44e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000875;1.15e-146;3!CL:0002396;1.15e-146;3!CL:0000766;3.91e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,1.47e-146,3;CL:0002396,1.47e-146,3;CL:0002393,9.25e-50,9;CL:0002397,9.25e-50,9;CL:0000860,1.73e-11,42;CL:0002057,1.73e-11,42;CL:0000473,3.64e-10,48;CL:0000234,3.64e-10,48;CL:0002194,2.64e-08,59;CL:0000576,2.64e-08,59;CL:0000040,2.64e-08,59;CL:0000559,2.64e-08,59;CL:0002009,4.61e-08,61;CL:0000839,1.60e-07,66;CL:0000557,2.01e-07,67;CL:0000766,5.71e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;2.71e-08;42 | |||
|ontology_enrichment_disease=DOID:4960!9.94e-08!1;DOID:0070004!9.94e-08!1 | |ontology_enrichment_disease=DOID:4960!9.94e-08!1;DOID:0070004!9.94e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:4556;7.35e-18;3!DOID:3908;2.80e-11;5!DOID:3905;7.69e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,6.76e-18,3;DOID:3908,2.66e-11,5;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.01e-24!102;UBERON:0003061!1.01e-24!102;UBERON:0002371!1.98e-23!80;UBERON:0002193!3.59e-22!112;UBERON:0001474!1.45e-21!86;UBERON:0004765!7.27e-18!101;UBERON:0001434!7.27e-18!101;UBERON:0002405!2.83e-15!115;UBERON:0003081!1.45e-09!216;UBERON:0002204!1.94e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr15:22550731..22550738,+ | |short_description=p@chr15:22550731..22550738,+ | ||
}} | }} |
Latest revision as of 00:22, 25 July 2015
Short description: | p@chr15:22550731..22550738, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:22550731..22550738, + |
Coexpression cluster: | C3474_large_CD14CD16_CD14_Basophils_Peripheral_Whole_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 1.47e-146 | 3 |
CD14-low, CD16-positive monocyte | 1.47e-146 | 3 |
intermediate monocyte | 9.25e-50 | 9 |
CD14-positive, CD16-positive monocyte | 9.25e-50 | 9 |
classical monocyte | 1.73e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-11 | 42 |
defensive cell | 3.64e-10 | 48 |
phagocyte | 3.64e-10 | 48 |
monopoietic cell | 2.64e-08 | 59 |
monocyte | 2.64e-08 | 59 |
monoblast | 2.64e-08 | 59 |
promonocyte | 2.64e-08 | 59 |
macrophage dendritic cell progenitor | 4.61e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.60e-07 | 66 |
granulocyte monocyte progenitor cell | 2.01e-07 | 67 |
myeloid leukocyte | 5.71e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 6.76e-18 | 3 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
lung carcinoma | 7.48e-07 | 9 |