FFCP PHASE1:Hg19::chr15:39420650..39420666,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:39420650..39420666,+
|short_description=p@chr15:39420650..39420666,+
|description=CAGE_peak_at_chr15:39420650..39420666,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39420650..39420666,+ | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr15:39420650..39420666,+ | |||
|id=chr15:39420650..39420666,+ | |||
|ontology_enrichment_celltype=CL:0002620!6.12e-15!23;CL:0000057!2.07e-12!75;CL:0002579!3.78e-10!3;CL:0000071!3.34e-08!18;CL:0002546!3.34e-08!18;CL:0000055!1.22e-07!180;CL:0002139!1.26e-07!24;CL:0002536!1.72e-07!2;CL:0002371!3.17e-07!591;CL:0002589!4.24e-07!2;CL:0000144!9.46e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.12e-50;1!CL:0002625;5.12e-50;1!CL:0000216;5.12e-50;1!CL:0000136;2.95e-16;13!CL:1000306;8.82e-14;4!CL:0002547;8.82e-14;4!CL:0000154;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.99e-50,1;CL:0002625,3.99e-50,1;CL:0000216,3.99e-50,1;CL:0000136,3.15e-14,15;CL:1000306,8.82e-14,4;CL:0002547,8.82e-14,4;CL:0000154,1.44e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.97e-11!5;DOID:450!3.97e-11!5;DOID:66!3.97e-11!5;DOID:423!3.97e-11!5;DOID:0080000!3.97e-11!5;DOID:11722!3.97e-11!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!1.41e-08!22;UBERON:0004872!2.43e-08!84;UBERON:0001986!3.34e-08!18;UBERON:0004638!3.34e-08!18;UBERON:0004852!3.34e-08!18;UBERON:0002097!1.31e-07!40;UBERON:0006914!2.22e-07!25;UBERON:0001529!4.24e-07!2;UBERON:0007204!4.24e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.12e-50;1!UBERON:0001343;5.12e-50;1!UBERON:0004910;5.12e-50;1!UBERON:0004813;5.12e-50;1!UBERON:0004909;8.10e-26;2!UBERON:0004797;8.82e-14;4!UBERON:0000415;8.82e-14;4!UBERON:0007240;8.82e-14;4!UBERON:0005742;8.82e-14;4!UBERON:0005734;8.82e-14;4!UBERON:0004664;8.82e-14;4!UBERON:0004663;8.82e-14;4!UBERON:0005904;1.21e-13;4!UBERON:0000473;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.99e-50,1;UBERON:0001343,3.99e-50,1;UBERON:0004910,3.99e-50,1;UBERON:0005154,3.99e-50,1;UBERON:0005295,3.99e-50,1;UBERON:0004813,3.99e-50,1;UBERON:0005297,3.99e-50,1;UBERON:0005294,3.99e-50,1;UBERON:0010141,3.99e-50,1;UBERON:0005891,3.99e-50,1;UBERON:0004909,7.14e-26,2;UBERON:0000415,8.82e-14,4;UBERON:0007240,8.82e-14,4;UBERON:0005742,8.82e-14,4;UBERON:0005734,8.82e-14,4;UBERON:0004664,8.82e-14,4;UBERON:0004663,8.82e-14,4;UBERON:0005904,1.13e-13,4;UBERON:0004797,1.89e-08,7;UBERON:0000473,1.69e-07,8;UBERON:0004871,1.69e-07,8 | |||
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| ||
|short_description=p@chr15:39420650..39420666,+ | |||
}} | }} |
Latest revision as of 01:09, 25 July 2015
Short description: | p@chr15:39420650..39420666, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39420650..39420666, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.99e-50 | 1 |
seminiferous tubule epithelial cell | 3.99e-50 | 1 |
Sertoli cell | 3.99e-50 | 1 |
fat cell | 3.15e-14 | 15 |
fibroblast of tunica adventitia of artery | 8.82e-14 | 4 |
fibroblast of the aortic adventitia | 8.82e-14 | 4 |
protein secreting cell | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.99e-50 | 1 |
seminiferous tubule of testis | 3.99e-50 | 1 |
epithelium of male gonad | 3.99e-50 | 1 |
epithelial cord | 3.99e-50 | 1 |
sex cord | 3.99e-50 | 1 |
seminiferous tubule epithelium | 3.99e-50 | 1 |
testis sex cord | 3.99e-50 | 1 |
genital ridge | 3.99e-50 | 1 |
primitive sex cord of indifferent gonad | 3.99e-50 | 1 |
coelomic epithelium | 3.99e-50 | 1 |
epithelium of gonad | 7.14e-26 | 2 |
artery wall | 8.82e-14 | 4 |
tunica adventitia of artery | 8.82e-14 | 4 |
adventitia | 8.82e-14 | 4 |
tunica adventitia of blood vessel | 8.82e-14 | 4 |
aorta tunica adventitia | 8.82e-14 | 4 |
aorta wall | 8.82e-14 | 4 |
duct of male reproductive system | 1.13e-13 | 4 |
blood vessel layer | 1.89e-08 | 7 |
testis | 1.69e-07 | 8 |
somatic layer of lateral plate mesoderm | 1.69e-07 | 8 |