FFCP PHASE1:Hg19::chr15:55700088..55700098,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:55700088..55700098,+ | |||
|coexpression_cluster_id=C2338 | |coexpression_cluster_id=C2338 | ||
|description=CAGE_peak_at_chr15:55700088..55700098,+ | |description=CAGE_peak_at_chr15:55700088..55700098,+ | ||
|id=chr15:55700088..55700098,+ | |id=chr15:55700088..55700098,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.60e-14!3;CL:0000861!1.60e-14!3;CL:0001014!5.82e-11!2;CL:0001016!5.82e-11!2;CL:0000860!7.89e-07!45 | |ontology_enrichment_celltype=CL:0002150!1.60e-14!3;CL:0000861!1.60e-14!3;CL:0001014!5.82e-11!2;CL:0001016!5.82e-11!2;CL:0000860!7.89e-07!45 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.90e-14;30!UBERON:0009497;5.49e-09;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;5.04e-34;3!DOID:3908;4.66e-21;5!DOID:3905;2.31e-12;9!DOID:1324;5.74e-08;15!DOID:0050615;1.49e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.27e-34,3;DOID:3908,4.21e-21,5;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.46e-13!9 | |ontology_enrichment_uberon=UBERON:0001737!9.46e-13!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002394;6.30e-26;4!UBERON:0003928;6.30e-26;4!UBERON:0002294;1.78e-15;7!UBERON:0001173;1.78e-15;7!UBERON:0000058;2.87e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,9.07e-18,6;UBERON:0003928,9.07e-18,6;UBERON:0002294,2.45e-12,9;UBERON:0001173,2.45e-12,9;UBERON:0004912,2.45e-12,9 | |||
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|short_description=p@chr15:55700088..55700098,+ | |short_description=p@chr15:55700088..55700098,+ | ||
}} | }} |
Latest revision as of 02:40, 25 July 2015
Short description: | p@chr15:55700088..55700098, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:55700088..55700098, + |
Coexpression cluster: | C2338_bile_large_hepatoma_epitheloid_immature_Hep2_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bile duct | 9.07e-18 | 6 |
digestive system duct | 9.07e-18 | 6 |
biliary system | 2.45e-12 | 9 |
biliary tree | 2.45e-12 | 9 |
biliary bud | 2.45e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.27e-34 | 3 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |