FFCP PHASE1:Hg19::chr15:56363776..56363799,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:56363776..56363799,+ | |||
|coexpression_cluster_id=C130 | |coexpression_cluster_id=C130 | ||
|description=CAGE_peak_at_chr15:56363776..56363799,+ | |description=CAGE_peak_at_chr15:56363776..56363799,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!6.44e-12!5;CL:0000066!7.55e-07!254 | |ontology_enrichment_celltype=CL:0002322!6.44e-12!5;CL:0000066!7.55e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.32e-27;5!CL:0002321;4.87e-09;15!CL:0000313;8.25e-07;1 | |ontology_enrichment_celltype_v019=CL:0002322;1.32e-27;5!CL:0002321;4.87e-09;15!CL:0000313;8.25e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.29e-27,5;CL:0000313,8.97e-07,1;CL:0002581,9.48e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!4.78e-11!106;DOID:299!9.57e-11!25;DOID:5093!2.18e-08!4;DOID:1612!2.18e-08!4;DOID:0050687!2.78e-07!143;DOID:120!5.49e-07!27;DOID:4362!7.26e-07!5 | |ontology_enrichment_disease=DOID:305!4.78e-11!106;DOID:299!9.57e-11!25;DOID:5093!2.18e-08!4;DOID:1612!2.18e-08!4;DOID:0050687!2.78e-07!143;DOID:120!5.49e-07!27;DOID:4362!7.26e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.49e-11;2!DOID:4362;7.02e-10;5!DOID:120;1.11e-08;27!DOID:193;5.09e-08;29!DOID:3151;6.42e-07;1!DOID:3149;6.42e-07;1!DOID:2152;8.25e-07;1 | |ontology_enrichment_disease_v019=DOID:4468;1.49e-11;2!DOID:4362;7.02e-10;5!DOID:120;1.11e-08;27!DOID:193;5.09e-08;29!DOID:3151;6.42e-07;1!DOID:3149;6.42e-07;1!DOID:2152;8.25e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,1.06e-11,2;DOID:4362,6.30e-10,5;DOID:120,1.03e-08,27;DOID:193,4.75e-08,29;DOID:3151,6.08e-07,1;DOID:3149,6.08e-07,1;DOID:2152,8.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003100!2.02e-12!41;UBERON:0003134!4.08e-11!37;UBERON:0000474!4.08e-11!37;UBERON:0005795!1.01e-10!22;UBERON:0000995!2.34e-09!21;UBERON:0003975!8.12e-09!22;UBERON:0000002!1.62e-08!6;UBERON:0001560!1.62e-08!6;UBERON:0003133!1.33e-07!48;UBERON:0004175!1.83e-07!25;UBERON:0001737!6.20e-07!9 | |ontology_enrichment_uberon=UBERON:0003100!2.02e-12!41;UBERON:0003134!4.08e-11!37;UBERON:0000474!4.08e-11!37;UBERON:0005795!1.01e-10!22;UBERON:0000995!2.34e-09!21;UBERON:0003975!8.12e-09!22;UBERON:0000002!1.62e-08!6;UBERON:0001560!1.62e-08!6;UBERON:0003133!1.33e-07!48;UBERON:0004175!1.83e-07!25;UBERON:0001737!6.20e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.29e-08;49!UBERON:0000002;2.60e-08;6!UBERON:0001560;2.60e-08;6!UBERON:0004911;8.25e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000922;1.29e-08;49!UBERON:0000002;2.60e-08;6!UBERON:0001560;2.60e-08;6!UBERON:0004911;8.25e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,2.38e-08,6;UBERON:0001560,2.38e-08,6;UBERON:0004911,8.97e-07,1 | |||
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| ||
|short_description=p@chr15:56363776..56363799,+ | |short_description=p@chr15:56363776..56363799,+ | ||
}} | }} |
Latest revision as of 02:42, 25 July 2015
Short description: | p@chr15:56363776..56363799, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56363776..56363799, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.29e-27 | 5 |
serous secreting cell | 8.97e-07 | 1 |
perirenal preadipocyte | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 2.38e-08 | 6 |
neck of organ | 2.38e-08 | 6 |
epithelium of female gonad | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.06e-11 | 2 |
cervical cancer | 6.30e-10 | 5 |
female reproductive organ cancer | 1.03e-08 | 27 |
reproductive organ cancer | 4.75e-08 | 29 |
skin squamous cell carcinoma | 6.08e-07 | 1 |
keratoacanthoma | 6.08e-07 | 1 |
ovary epithelial cancer | 8.97e-07 | 1 |