FFCP PHASE1:Hg19::chr16:61687533..61687551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:61687533..61687551,- | |||
|coexpression_cluster_id=C1044 | |coexpression_cluster_id=C1044 | ||
|description=CAGE_peak_at_chr16:61687533..61687551,- | |description=CAGE_peak_at_chr16:61687533..61687551,- | ||
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|ontology_enrichment_celltype=CL:0002583!2.07e-10!2;CL:0000239!1.82e-07!3;CL:1000615!1.82e-07!3;CL:0002306!1.82e-07!3 | |ontology_enrichment_celltype=CL:0002583!2.07e-10!2;CL:0000239!1.82e-07!3;CL:1000615!1.82e-07!3;CL:0002306!1.82e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000239;2.39e-66;3!CL:1000615;2.39e-66;3!CL:0002306;2.39e-66;3!CL:1000507;3.81e-21;10!CL:1000494;3.81e-21;10!CL:0002681;6.76e-18;12!CL:0002584;6.76e-18;12!CL:1000449;1.22e-14;15!CL:1000497;4.22e-13;17!CL:0002518;4.22e-13;17!CL:0000075;8.32e-09;27!CL:0002078;4.53e-08;45 | |ontology_enrichment_celltype_v019=CL:0000239;2.39e-66;3!CL:1000615;2.39e-66;3!CL:0002306;2.39e-66;3!CL:1000507;3.81e-21;10!CL:1000494;3.81e-21;10!CL:0002681;6.76e-18;12!CL:0002584;6.76e-18;12!CL:1000449;1.22e-14;15!CL:1000497;4.22e-13;17!CL:0002518;4.22e-13;17!CL:0000075;8.32e-09;27!CL:0002078;4.53e-08;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.39e-66,3;CL:1000615,2.39e-66,3;CL:0002306,2.39e-66,3;CL:1000507,3.81e-21,10;CL:1000494,3.81e-21,10;CL:0002681,6.76e-18,12;CL:0002584,6.76e-18,12;CL:1000449,1.22e-14,15;CL:1000497,4.22e-13,17;CL:0002518,4.22e-13,17;CL:0000075,8.32e-09,27 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3307!1.57e-10!2 | |ontology_enrichment_disease=DOID:3307!1.57e-10!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.39e-66,3;UBERON:0007685,2.39e-66,3;UBERON:0004134,2.39e-66,3;UBERON:0004810,3.81e-21,10;UBERON:0001225,6.76e-18,12;UBERON:0008987,6.76e-18,12;UBERON:0001851,1.22e-14,15;UBERON:0004211,1.22e-14,15;UBERON:0009773,1.22e-14,15;UBERON:0000353,1.22e-14,15;UBERON:0001231,1.22e-14,15;UBERON:0001285,1.22e-14,15;UBERON:0007684,1.22e-14,15;UBERON:0004208,1.22e-14,15;UBERON:0006555,8.02e-14,16;UBERON:0004819,8.02e-14,16;UBERON:0002113,4.34e-09,26;UBERON:0003918,4.34e-09,26;UBERON:0011143,4.34e-09,26;UBERON:0005095,4.34e-09,26;UBERON:0007687,4.34e-09,26;UBERON:0000489,7.41e-08,31 | |||
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|short_description=p@chr16:61687533..61687551,- | |short_description=p@chr16:61687533..61687551,- | ||
}} | }} |
Latest revision as of 10:55, 25 July 2015
Short description: | p@chr16:61687533..61687551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:61687533..61687551, - |
Coexpression cluster: | C1044_Renal_amniotic_Mammary_chorionic_bile_prostate_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.39e-66 | 3 |
kidney cortex tubule cell | 2.39e-66 | 3 |
epithelial cell of proximal tubule | 2.39e-66 | 3 |
kidney tubule cell | 3.81e-21 | 10 |
nephron tubule epithelial cell | 3.81e-21 | 10 |
kidney cortical cell | 6.76e-18 | 12 |
renal cortical epithelial cell | 6.76e-18 | 12 |
epithelial cell of nephron | 1.22e-14 | 15 |
kidney cell | 4.22e-13 | 17 |
kidney epithelial cell | 4.22e-13 | 17 |
columnar/cuboidal epithelial cell | 8.32e-09 | 27 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.39e-66 | 3 |
region of nephron tubule | 2.39e-66 | 3 |
proximal tubule | 2.39e-66 | 3 |
nephron tubule epithelium | 3.81e-21 | 10 |
cortex of kidney | 6.76e-18 | 12 |
renal parenchyma | 6.76e-18 | 12 |
cortex | 1.22e-14 | 15 |
nephron epithelium | 1.22e-14 | 15 |
renal tubule | 1.22e-14 | 15 |
parenchyma | 1.22e-14 | 15 |
nephron tubule | 1.22e-14 | 15 |
nephron | 1.22e-14 | 15 |
uriniferous tubule | 1.22e-14 | 15 |
nephrogenic mesenchyme | 1.22e-14 | 15 |
excretory tube | 8.02e-14 | 16 |
kidney epithelium | 8.02e-14 | 16 |
kidney | 4.34e-09 | 26 |
kidney mesenchyme | 4.34e-09 | 26 |
upper urinary tract | 4.34e-09 | 26 |
kidney rudiment | 4.34e-09 | 26 |
kidney field | 4.34e-09 | 26 |
cavitated compound organ | 7.41e-08 | 31 |