FFCP PHASE1:Hg19::chr16:68420720..68420727,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:68420720..68420727,- | |||
|coexpression_cluster_id=C127 | |coexpression_cluster_id=C127 | ||
|description=CAGE_peak_at_chr16:68420720..68420727,- | |description=CAGE_peak_at_chr16:68420720..68420727,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.04e-10;3 | |ontology_enrichment_celltype_v019=CL:0002178;1.04e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.20e-10,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050619!4.28e-08!1;DOID:1357!4.28e-08!1 | |ontology_enrichment_disease=DOID:0050619!4.28e-08!1;DOID:1357!4.28e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;7.48e-30;1!DOID:1357;7.48e-30;1 | |ontology_enrichment_disease_v019=DOID:0050619;7.48e-30;1!DOID:1357;7.48e-30;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,7.48e-30,1;DOID:1357,7.48e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.45e-13!35;UBERON:0004921!3.83e-12!129;UBERON:0004185!3.83e-12!129;UBERON:0001007!3.90e-12!155;UBERON:0001555!3.90e-12!155;UBERON:0007026!3.90e-12!155;UBERON:0004119!8.43e-11!169;UBERON:0000925!8.43e-11!169;UBERON:0006595!8.43e-11!169;UBERON:0000160!1.86e-10!27;UBERON:0001764!4.28e-08!1;UBERON:0001825!4.28e-08!1;UBERON:0001154!9.44e-08!1;UBERON:0001153!9.44e-08!1;UBERON:0002171!1.30e-07!1;UBERON:0006518!1.30e-07!1;UBERON:0008949!1.30e-07!1;UBERON:0000101!1.30e-07!1;UBERON:0002167!1.30e-07!1;UBERON:0006834!2.17e-07!1;UBERON:0002372!2.80e-07!1;UBERON:0001961!2.80e-07!1;UBERON:0001744!2.80e-07!1;UBERON:0001735!2.80e-07!1;UBERON:0001155!4.74e-07!9;UBERON:0007023!9.25e-07!115 | |ontology_enrichment_uberon=UBERON:0005409!4.45e-13!35;UBERON:0004921!3.83e-12!129;UBERON:0004185!3.83e-12!129;UBERON:0001007!3.90e-12!155;UBERON:0001555!3.90e-12!155;UBERON:0007026!3.90e-12!155;UBERON:0004119!8.43e-11!169;UBERON:0000925!8.43e-11!169;UBERON:0006595!8.43e-11!169;UBERON:0000160!1.86e-10!27;UBERON:0001764!4.28e-08!1;UBERON:0001825!4.28e-08!1;UBERON:0001154!9.44e-08!1;UBERON:0001153!9.44e-08!1;UBERON:0002171!1.30e-07!1;UBERON:0006518!1.30e-07!1;UBERON:0008949!1.30e-07!1;UBERON:0000101!1.30e-07!1;UBERON:0002167!1.30e-07!1;UBERON:0006834!2.17e-07!1;UBERON:0002372!2.80e-07!1;UBERON:0001961!2.80e-07!1;UBERON:0001744!2.80e-07!1;UBERON:0001735!2.80e-07!1;UBERON:0001155!4.74e-07!9;UBERON:0007023!9.25e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;7.48e-30;1!UBERON:0001825;7.48e-30;1!UBERON:0005409;9.92e-12;22!UBERON:0000160;3.14e-07;17!UBERON:0004921;4.29e-07;33!UBERON:0002107;6.10e-07;19!UBERON:0006925;6.10e-07;19!UBERON:0002108;6.21e-07;4!UBERON:0000945;6.21e-07;5!UBERON:0010039;6.21e-07;5!UBERON:0001007;9.20e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0001764;7.48e-30;1!UBERON:0001825;7.48e-30;1!UBERON:0005409;9.92e-12;22!UBERON:0000160;3.14e-07;17!UBERON:0004921;4.29e-07;33!UBERON:0002107;6.10e-07;19!UBERON:0006925;6.10e-07;19!UBERON:0002108;6.21e-07;4!UBERON:0000945;6.21e-07;5!UBERON:0010039;6.21e-07;5!UBERON:0001007;9.20e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,7.48e-30,1;UBERON:0001825,7.48e-30,1;UBERON:0005409,1.82e-10,25;UBERON:0000160,2.95e-07,17;UBERON:0002108,5.70e-07,4;UBERON:0002107,6.19e-07,19;UBERON:0006925,6.19e-07,19;UBERON:0008836,6.19e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.32686346755009,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07759690723973,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,4.71162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,1.77500563648273,0.655678681511872,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.932388670104793,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.32686346755009,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07759690723973,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,4.71162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,1.77500563648273,0.655678681511872,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.932388670104793,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr16:68420720..68420727,- | |short_description=p@chr16:68420720..68420727,- | ||
}} | }} |
Latest revision as of 11:44, 25 July 2015
Short description: | p@chr16:68420720..68420727, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:68420720..68420727, - |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 7.48e-30 | 1 |
paranasal sinus | 7.48e-30 | 1 |
gastrointestinal system | 1.82e-10 | 25 |
intestine | 2.95e-07 | 17 |
small intestine | 5.70e-07 | 4 |
liver | 6.19e-07 | 19 |
digestive gland | 6.19e-07 | 19 |
liver bud | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 7.48e-30 | 1 |
maxillary sinus cancer | 7.48e-30 | 1 |