FFCP PHASE1:Hg19::chr16:72325444..72325473,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-129bp_to_uc002fcg.1_5end | |association_with_transcript=-129bp_to_uc002fcg.1_5end | ||
|cluster_id=chr16:72325444..72325473,- | |||
|description=CAGE_peak_1_at_uc002fcg.1_5end | |description=CAGE_peak_1_at_uc002fcg.1_5end | ||
|id=chr16:72325444..72325473,- | |id=chr16:72325444..72325473,- | ||
|ontology_enrichment_celltype=CL:0000055!2.09e-12!180;CL:0000057!8.75e-09!75;CL:0002371!2.90e-07!591;CL:0000188!4.04e-07!9 | |ontology_enrichment_celltype=CL:0000055!2.09e-12!180;CL:0000057!8.75e-09!75;CL:0002371!2.90e-07!591;CL:0000188!4.04e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002327;5.04e-29;4!CL:0000317;1.27e-25;2!CL:1000448;1.27e-25;2!CL:0002308;1.27e-25;2!CL:0002140;1.27e-25;2!CL:0002541;1.94e-17;3!CL:0000622;7.50e-11;5!CL:0000154;3.41e-09;6 | |ontology_enrichment_celltype_v019=CL:0002327;5.04e-29;4!CL:0000317;1.27e-25;2!CL:1000448;1.27e-25;2!CL:0002308;1.27e-25;2!CL:0002140;1.27e-25;2!CL:0002541;1.94e-17;3!CL:0000622;7.50e-11;5!CL:0000154;3.41e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.83e-29,4;CL:0000317,1.12e-25,2;CL:1000448,1.12e-25,2;CL:0002308,1.12e-25,2;CL:0002140,1.12e-25,2;CL:0002541,1.79e-17,3;CL:0000622,7.14e-11,5;CL:0000154,3.28e-09,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!7.42e-09!95;UBERON:0000468!2.39e-07!659;UBERON:0000475!2.59e-07!365;UBERON:0000467!3.68e-07!625;UBERON:0000480!4.35e-07!626;UBERON:0000914!8.55e-07!83;UBERON:0002329!8.55e-07!83;UBERON:0003077!8.55e-07!83;UBERON:0003059!8.55e-07!83;UBERON:0007282!8.55e-07!83;UBERON:0009618!8.55e-07!83;UBERON:0007285!8.55e-07!83 | |ontology_enrichment_uberon=UBERON:0003102!7.42e-09!95;UBERON:0000468!2.39e-07!659;UBERON:0000475!2.59e-07!365;UBERON:0000467!3.68e-07!625;UBERON:0000480!4.35e-07!626;UBERON:0000914!8.55e-07!83;UBERON:0002329!8.55e-07!83;UBERON:0003077!8.55e-07!83;UBERON:0003059!8.55e-07!83;UBERON:0007282!8.55e-07!83;UBERON:0009618!8.55e-07!83;UBERON:0007285!8.55e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;5.04e-29;4!UBERON:0002419;1.27e-25;2!UBERON:0007771;1.27e-25;2!UBERON:0003297;1.27e-25;2!UBERON:0001821;1.27e-25;2!UBERON:0003487;1.27e-25;2!UBERON:0001820;1.27e-25;2!UBERON:0003124;1.94e-17;3!UBERON:0000920;1.94e-17;3!UBERON:0002365;1.04e-09;31!UBERON:0002330;1.04e-09;31!UBERON:0000007;1.70e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001911;5.04e-29;4!UBERON:0002419;1.27e-25;2!UBERON:0007771;1.27e-25;2!UBERON:0003297;1.27e-25;2!UBERON:0001821;1.27e-25;2!UBERON:0003487;1.27e-25;2!UBERON:0001820;1.27e-25;2!UBERON:0003124;1.94e-17;3!UBERON:0000920;1.94e-17;3!UBERON:0002365;1.04e-09;31!UBERON:0002330;1.04e-09;31!UBERON:0000007;1.70e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.83e-29,4;UBERON:0005333,5.83e-29,4;UBERON:0008425,5.83e-29,4;UBERON:0005311,5.83e-29,4;UBERON:0002419,1.12e-25,2;UBERON:0007771,1.12e-25,2;UBERON:0003297,1.12e-25,2;UBERON:0001821,1.12e-25,2;UBERON:0003487,1.12e-25,2;UBERON:0001820,1.12e-25,2;UBERON:0005089,1.12e-25,2;UBERON:0005088,1.12e-25,2;UBERON:0000920,1.79e-17,3;UBERON:0000076,8.01e-15,8;UBERON:0002365,4.58e-10,31;UBERON:0005085,4.58e-10,31;UBERON:0002330,4.58e-10,31;UBERON:0003124,5.10e-08,7;UBERON:0000007,1.99e-07,2;UBERON:0002530,2.79e-07,59 | |||
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| ||
|short_description=p1@uc002fcg.1 | |short_description=p1@uc002fcg.1 | ||
}} | }} |
Latest revision as of 12:11, 25 July 2015
Short description: | p1@uc002fcg.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002fcg.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -129bp_to_uc002fcg.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.83e-29 | 4 |
sebum secreting cell | 1.12e-25 | 2 |
epithelial cell of sweat gland | 1.12e-25 | 2 |
epithelial cell of skin gland | 1.12e-25 | 2 |
acinar cell of sebaceous gland | 1.12e-25 | 2 |
chorionic membrane mesenchymal stem cell | 1.79e-17 | 3 |
acinar cell | 7.14e-11 | 5 |
protein secreting cell | 3.28e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.83e-29 | 4 |
mammary bud | 5.83e-29 | 4 |
mammary ridge | 5.83e-29 | 4 |
mammary placode | 5.83e-29 | 4 |
skin gland | 1.12e-25 | 2 |
epidermis gland | 1.12e-25 | 2 |
gland of integumental system | 1.12e-25 | 2 |
sebaceous gland | 1.12e-25 | 2 |
skin sebaceous gland | 1.12e-25 | 2 |
sweat gland | 1.12e-25 | 2 |
sweat gland placode | 1.12e-25 | 2 |
sebaceous gland placode | 1.12e-25 | 2 |
egg chorion | 1.79e-17 | 3 |
external ectoderm | 8.01e-15 | 8 |
exocrine gland | 4.58e-10 | 31 |
ectodermal placode | 4.58e-10 | 31 |
exocrine system | 4.58e-10 | 31 |
chorion | 5.10e-08 | 7 |
pituitary gland | 1.99e-07 | 2 |
gland | 2.79e-07 | 59 |