FFCP PHASE1:Hg19::chr16:87873403..87873438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87873403..87873438,- | |||
|coexpression_cluster_id=C570 | |||
|description=CAGE_peak_at_chr16:87873403..87873438,- | |description=CAGE_peak_at_chr16:87873403..87873438,- | ||
|id=chr16:87873403..87873438,- | |id=chr16:87873403..87873438,- | ||
|ontology_enrichment_celltype=CL:0000066!3.12e-25!254;CL:0000223!1.82e-12!59;CL:0002076!1.92e-12!43;CL:0000063!7.87e-11!578;CL:0000548!1.02e-10!679;CL:0000004!1.02e-10!679;CL:0000255!1.02e-10!679;CL:0000012!1.35e-10!682;CL:0002077!3.20e-07!33 | |ontology_enrichment_celltype=CL:0000066!3.12e-25!254;CL:0000223!1.82e-12!59;CL:0002076!1.92e-12!43;CL:0000063!7.87e-11!578;CL:0000548!1.02e-10!679;CL:0000004!1.02e-10!679;CL:0000255!1.02e-10!679;CL:0000012!1.35e-10!682;CL:0002077!3.20e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.93e-12;42!CL:0002251;5.32e-08;20!CL:0002368;1.42e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.10e-27,253;CL:0002076,2.68e-16,42;CL:0000223,9.07e-16,58;CL:0002251,8.23e-08,20;CL:0002368,1.15e-07,13;CL:0002077,2.41e-07,34;CL:0002321,4.69e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;1.16e-08;58 | |||
|ontology_enrichment_disease=DOID:0050687!3.03e-14!143;DOID:305!1.43e-12!106;DOID:14566!6.00e-12!239;DOID:162!1.08e-11!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.96e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.79e-09,106;DOID:1749,3.53e-09,14;DOID:0050687,5.71e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.53e-07!169;UBERON:0000925!1.53e-07!169;UBERON:0006595!1.53e-07!169 | |ontology_enrichment_uberon=UBERON:0004119!1.53e-07!169;UBERON:0000925!1.53e-07!169;UBERON:0006595!1.53e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.83e-07;9!UBERON:0001557;2.83e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.84e-08,74;UBERON:0001737,1.08e-07,9;UBERON:0004119,2.99e-07,160;UBERON:0000925,2.99e-07,160;UBERON:0006595,2.99e-07,160 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0,0.491467873003018,2.09340350391728,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0.123121058076788,0.612002073732759,2.19418305034661,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0.157421562627358,0.786728553697808,0,0.154816123316076,2.75826367343678,2.71085326900425,4.80680213216824,0.0774672005803016,0.284338464974843,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0.697287110717054,0.411167888021826,0.619412741790207,0.863077176966451,0.768482119587302,0.709446689665756,1.37898272294647,0,1.35426486594342,1.12945403725563,1.36453075028923,0.224723484445085,2.14258724659632,1.28371610830437,1.27867425159808,0.659702600373432,0.398927315243264,0.426224750532694,4.35313857942876,2.26954089876456,2.4912889959823,0.75374599577023,0,0,4.84319602106695,1.84138817993782,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,1.06976078313403,0.434473211648397,0,0,0.12786256184353,1.44575660953827,1.50401373190767,0.724232594804119,0,1.45990461090791,0,0.221729397462564,0.351339142772504,0.196468613246569,4.37154345951051,4.82019775619758,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0.949265659568129,0.183201743930407,0,0,3.48875241714027,0.993943903390637,0.633152558322899,0,1.43418310374407,0.354668382198357,1.12135520028461,3.20246987189115,0.98667019366864,0,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0,0.352303495931295,0.647491777472526,0.140450806702248,0,0,0.206651562351531,0,0.989067717114227,0,1.43723628363248,0.168336113954066,0,0,0,0.612975591598039,1.05166641234618,0,0.538168907066586,0.85422955527427,0,1.50045548042201,0.412210116953756,0,0.37223371266318,0,0.292311015483596,0.252433774244115,0.184099797284599,0,0.355009592516614,0.201504196455281,0.169560592310488,3.47869535693934,2.72746120590835,2.86804595389004,0.365921118388786,0.132529768321485,0.813357600086629,0.207322110030741,0.252320850875628,0.36497735907583,1.56449532329816,1.92972281457866,0,0,0,3.07597680103594,1.68584690078102,1.68707720918437,1.10293972732394,1.96091499683166,1.89816495288877,2.15730093056263,0.784885860501384,2.30848294167834,0.738155454624648,5.60967095213783,0,0,0,0,0,0,0.368965315629341,0.343135620597051,5.92651541206578,2.24803506515239,1.80952150340936,1.85176890317059,1.3032332212413,0,0,0.115930404975077,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0.425325291727159,1.97028749946266,1.16253575405585,3.83382679165211,0,0.616339038092582,0.207328115540772,0.288239906833923,0.12624243342638,1.0159663086747,29.4131087679874,18.7547915536075,5.13217338068116,2.87916979569306,3.00343057843917,4.0015700568281,0.112131084345361,0,0,1.16344544182,0,0.845302752556,1.32969058292435,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.399891964728228,0,0,2.10833939483032,1.19812427745791,1.14861935834114,0,0.434343920002738,0,0,0.448340575974109,0,0.646882724578552,0,0.76228387266739,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0.415941723061614,1.60586089917446,0.473107245101804,0.234282829985426,1.20378439891088,11.3703752027992,1.03473071292505,0,0.368738337083406,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0.426910231213777,4.54691357169389,6.65741758041988,2.41912234663744,2.23297027036899,0.306923946576125,1.12264037773229,1.15325234330131,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,3.86750238693191,7.41873940122154,20.441979543769,0.34444334449382,0.364182336013434,0.524497659837696,1.35359883872224,0.15403067420883,2.35304930753057,0,0.211103257785751,0,0,0.647747748306418,0,0.270946437543853,0.501689773854853,0.254876273045038,2.49322802678617,1.11937377361089,0.657779629937804,0.261435451024901,0.256450125116389,0.656029291399411,2.60302715731442,0.824328093181778,0.27470839445503,0.165018999841176,2.87132768998086,10.4009639365843,0,3.0934629853479,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0,0.170453254832202,1.24644849905432,8.42953068340988,6.53446229041361,0.382838137483752,6.37294019389965,0,0.62962469366128,0.6970372701606,0.308033580176089,0,0,0.74129687641568,0.429374660225974,0,0.632758849437452,0,0,0,0,0.78494864019923,0,0,0,0.606547444719948,0,0,0,0.487426979262569,0,0.545999645631943,1.41405431953713,0,0,0,0.438450885253763,1.15755106853338,0,0.811641507850816,0,0,0.143411352204052,0.294747123039363,1.426684205925,0.709522128141196,0.633322905892992,0.329294892959902,0.75894634753143,1.04980416073495,3.94510662174599,1.34060455107157,7.62236894029258,0.564862804660675,5.16606447205476,0,1.7737206141467,0.459446800413919,0,0,0,0,0,0,0,0,0,1.92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| ||
|short_description=p@chr16:87873403..87873438,- | |short_description=p@chr16:87873403..87873438,- | ||
}} | }} |
Latest revision as of 13:13, 25 July 2015
Short description: | p@chr16:87873403..87873438, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87873403..87873438, - |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.10e-27 | 253 |
endo-epithelial cell | 2.68e-16 | 42 |
endodermal cell | 9.07e-16 | 58 |
epithelial cell of alimentary canal | 8.23e-08 | 20 |
respiratory epithelial cell | 1.15e-07 | 13 |
ecto-epithelial cell | 2.41e-07 | 34 |
embryonic cell | 4.69e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.84e-08 | 74 |
larynx | 1.08e-07 | 9 |
endoderm-derived structure | 2.99e-07 | 160 |
endoderm | 2.99e-07 | 160 |
presumptive endoderm | 2.99e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.79e-09 | 106 |
squamous cell carcinoma | 3.53e-09 | 14 |
cell type cancer | 5.71e-08 | 143 |