FFCP PHASE1:Hg19::chr17:19398674..19398685,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:19398674..19398685,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr17:19398674..19398685,+ | |description=CAGE_peak_at_chr17:19398674..19398685,+ | ||
|id=chr17:19398674..19398685,+ | |id=chr17:19398674..19398685,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.40e-12!7;CL:0000586!1.40e-12!7;CL:0000319!1.57e-10!1;CL:0002322!4.86e-08!5 | |ontology_enrichment_celltype=CL:0000039!1.40e-12!7;CL:0000586!1.40e-12!7;CL:0000319!1.57e-10!1;CL:0002322!4.86e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.52e-29;7!CL:0000586;9.52e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.08e-29,7;CL:0000586,9.08e-29,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.49e-35;10!UBERON:0005564;1.49e-35;10 | |||
|ontology_enrichment_disease=DOID:3030!1.57e-10!1;DOID:3095!5.97e-07!22;DOID:2994!5.97e-07!22 | |ontology_enrichment_disease=DOID:3030!1.57e-10!1;DOID:3095!5.97e-07!22;DOID:2994!5.97e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.59e-16;22!DOID:2994;2.59e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.64e-16,22;DOID:2994,2.64e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.36e-19!8;UBERON:0003135!7.02e-14!11;UBERON:0000997!9.84e-11!1;UBERON:0005056!9.84e-11!1;UBERON:0004176!1.55e-10!22;UBERON:0002581!2.50e-10!1;UBERON:0002902!4.33e-10!1;UBERON:0009899!4.33e-10!1;UBERON:0001872!3.52e-08!5;UBERON:0000991!2.43e-07!21;UBERON:0009196!2.43e-07!21;UBERON:0009117!2.43e-07!21;UBERON:0005564!2.43e-07!21;UBERON:0003101!5.18e-07!22;UBERON:0000079!5.18e-07!22;UBERON:0001950!5.61e-07!20 | |ontology_enrichment_uberon=UBERON:0000473!5.36e-19!8;UBERON:0003135!7.02e-14!11;UBERON:0000997!9.84e-11!1;UBERON:0005056!9.84e-11!1;UBERON:0004176!1.55e-10!22;UBERON:0002581!2.50e-10!1;UBERON:0002902!4.33e-10!1;UBERON:0009899!4.33e-10!1;UBERON:0001872!3.52e-08!5;UBERON:0000991!2.43e-07!21;UBERON:0009196!2.43e-07!21;UBERON:0009117!2.43e-07!21;UBERON:0005564!2.43e-07!21;UBERON:0003101!5.18e-07!22;UBERON:0000079!5.18e-07!22;UBERON:0001950!5.61e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.84e-44;8!UBERON:0003135;2.23e-32;11!UBERON:0000997;2.34e-23;1!UBERON:0005056;2.34e-23;1!UBERON:0004176;2.34e-23;1!UBERON:0000991;3.19e-17;21!UBERON:0003101;1.84e-16;22!UBERON:0000079;1.84e-16;22!UBERON:0003133;1.07e-08;44!UBERON:0001052;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.84e-44,8;UBERON:0003135,2.23e-32,11;UBERON:0004176,3.38e-25,22;UBERON:0000997,2.62e-23,1;UBERON:0005056,2.62e-23,1;UBERON:0000991,3.19e-17,21;UBERON:0009196,3.19e-17,21;UBERON:0009117,3.19e-17,21;UBERON:0005564,3.19e-17,21;UBERON:0003101,1.84e-16,22;UBERON:0000079,1.84e-16,22;UBERON:0003133,1.09e-11,48;UBERON:0005156,1.54e-09,59;UBERON:0000990,1.54e-09,59;UBERON:0002323,4.45e-08,46;UBERON:0004458,1.33e-07,49;UBERON:0003886,6.31e-07,54;UBERON:0001052,9.11e-07,4 | |||
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|short_description=p@chr17:19398674..19398685,+ | |short_description=p@chr17:19398674..19398685,+ | ||
}} | }} |
Latest revision as of 14:32, 25 July 2015
Short description: | p@chr17:19398674..19398685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:19398674..19398685, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.08e-29 | 7 |
germ cell | 9.08e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.84e-44 | 8 |
male reproductive organ | 2.23e-32 | 11 |
external genitalia | 3.38e-25 | 22 |
mammalian vulva | 2.62e-23 | 1 |
external female genitalia | 2.62e-23 | 1 |
gonad | 3.19e-17 | 21 |
indifferent external genitalia | 3.19e-17 | 21 |
indifferent gonad | 3.19e-17 | 21 |
gonad primordium | 3.19e-17 | 21 |
male organism | 1.84e-16 | 22 |
male reproductive system | 1.84e-16 | 22 |
reproductive organ | 1.09e-11 | 48 |
reproductive structure | 1.54e-09 | 59 |
reproductive system | 1.54e-09 | 59 |
body cavity | 4.45e-08 | 46 |
body cavity or lining | 1.33e-07 | 49 |
body cavity precursor | 6.31e-07 | 54 |
rectum | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.64e-16 | 22 |
germ cell cancer | 2.64e-16 | 22 |