FFCP PHASE1:Hg19::chr17:39659818..39659840,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39659818..39659840,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_at_chr17:39659818..39659840,- | |description=CAGE_peak_at_chr17:39659818..39659840,- | ||
|id=chr17:39659818..39659840,- | |id=chr17:39659818..39659840,- | ||
|ontology_enrichment_celltype=CL:0002591!4.87e-10!1;CL:0002616!6.31e-10!1 | |ontology_enrichment_celltype=CL:0002591!4.87e-10!1;CL:0002616!6.31e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0002591;2.21e-40;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.21e-40,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!1.25e-09!1;DOID:326!1.25e-09!1;DOID:3978!1.25e-09!1;DOID:3394!1.25e-09!1;DOID:5844!1.25e-09!1;DOID:4235!1.48e-09!1 | |ontology_enrichment_disease=DOID:178!1.25e-09!1;DOID:326!1.25e-09!1;DOID:3978!1.25e-09!1;DOID:3394!1.25e-09!1;DOID:5844!1.25e-09!1;DOID:4235!1.48e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:4362;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.88e-17!2;UBERON:0003126!2.67e-11!7;UBERON:0001005!2.67e-11!7;UBERON:0002372!8.17e-10!1;UBERON:0001961!8.17e-10!1;UBERON:0001744!8.17e-10!1;UBERON:0001735!8.17e-10!1;UBERON:0001042!3.22e-08!10;UBERON:0009145!3.22e-08!10;UBERON:0006562!1.64e-07!11;UBERON:0003103!9.77e-07!69 | |ontology_enrichment_uberon=UBERON:0003127!1.88e-17!2;UBERON:0003126!2.67e-11!7;UBERON:0001005!2.67e-11!7;UBERON:0002372!8.17e-10!1;UBERON:0001961!8.17e-10!1;UBERON:0001744!8.17e-10!1;UBERON:0001735!8.17e-10!1;UBERON:0001042!3.22e-08!10;UBERON:0009145!3.22e-08!10;UBERON:0006562!1.64e-07!11;UBERON:0003103!9.77e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;2.21e-40;1!UBERON:0000341;3.81e-21;2!UBERON:0000078;5.69e-21;2!UBERON:0002012;5.69e-21;2!UBERON:0008886;5.69e-21;2!UBERON:0002050;3.22e-09;5!UBERON:0005423;3.22e-09;5!UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6!UBERON:0000974;5.92e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.81e-21,2;UBERON:0000078,5.70e-21,2;UBERON:0007497,5.70e-21,2;UBERON:0003643,5.70e-21,2;UBERON:0003504,5.70e-21,2;UBERON:0003469,5.70e-21,2;UBERON:0003496,5.70e-21,2;UBERON:0002012,5.70e-21,2;UBERON:0008886,5.70e-21,2;UBERON:0007303,5.70e-21,2;UBERON:0002061,5.70e-21,2;UBERON:0005432,5.70e-21,2;UBERON:0004363,5.70e-21,2;UBERON:0004145,1.83e-14,3;UBERON:0003498,3.22e-09,5;UBERON:0005985,3.22e-09,5;UBERON:0005795,2.93e-08,22;UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6;UBERON:0010188,6.78e-08,6;UBERON:0002539,6.78e-08,6;UBERON:0003351,6.78e-08,6;UBERON:0008816,6.78e-08,6 | |||
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|short_description=p@chr17:39659818..39659840,- | |short_description=p@chr17:39659818..39659840,- | ||
}} | }} |
Latest revision as of 16:41, 25 July 2015
Short description: | p@chr17:39659818..39659840, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39659818..39659840, - |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.21e-40 | 1 |
Ontology term | p-value | n |
---|---|---|
throat | 3.81e-21 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 5.70e-21 | 2 |
developing epithelial placode | 5.70e-21 | 2 |
respiratory system arterial blood vessel | 5.70e-21 | 2 |
respiratory system blood vessel | 5.70e-21 | 2 |
respiratory system artery | 5.70e-21 | 2 |
head blood vessel | 5.70e-21 | 2 |
pulmonary artery | 5.70e-21 | 2 |
pulmonary vascular system | 5.70e-21 | 2 |
pharyngeal vasculature | 5.70e-21 | 2 |
truncus arteriosus | 5.70e-21 | 2 |
aortic sac | 5.70e-21 | 2 |
pharyngeal arch artery | 5.70e-21 | 2 |
outflow tract | 1.83e-14 | 3 |
heart blood vessel | 3.22e-09 | 5 |
coronary vessel | 3.22e-09 | 5 |
embryonic uterus | 2.93e-08 | 22 |
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
protuberance | 6.78e-08 | 6 |
pharyngeal arch | 6.78e-08 | 6 |
pharyngeal epithelium | 6.78e-08 | 6 |
embryonic head | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.53e-09 | 5 |