FFCP PHASE1:Hg19::chr17:39740112..39740148,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3861 | |EntrezGene=entrezgene:3861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6416 | |HGNC=HGNC:6416 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-405bp_to_ENST00000441550_5end | |association_with_transcript=-405bp_to_ENST00000441550_5end | ||
|cluster_id=chr17:39740112..39740148,- | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_4_at_KRT14_5end | |description=CAGE_peak_4_at_KRT14_5end |
Revision as of 16:43, 25 July 2015
Short description: | p4@KRT14 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KRT14_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | -405bp_to_ENST00000441550_5end |
EntrezGene: | 3861 |
HGNC: | 6416 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@KRT14 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.69e-32 | 14 |
endo-epithelial cell | 1.35e-31 | 42 |
acinar cell | 3.00e-23 | 5 |
endodermal cell | 1.04e-21 | 58 |
protein secreting cell | 2.42e-19 | 6 |
epithelial cell of tracheobronchial tree | 7.82e-19 | 9 |
epithelial cell of lower respiratory tract | 7.82e-19 | 9 |
epithelial cell of alimentary canal | 3.12e-17 | 20 |
respiratory epithelial cell | 4.65e-17 | 13 |
epithelial cell | 3.48e-16 | 253 |
Showing 1 to 10 of 38 entries
Ontology term | p-value | n |
---|---|---|
surface structure | 1.61e-19 | 99 |
oral opening | 1.73e-15 | 22 |
head | 2.39e-15 | 56 |
lower respiratory tract epithelium | 2.70e-15 | 3 |
epithelium of bronchus | 2.70e-15 | 3 |
gingival epithelium | 2.12e-14 | 3 |
mouth | 4.44e-14 | 29 |
stomodeum | 4.44e-14 | 29 |
anterior region of body | 1.54e-13 | 62 |
craniocervical region | 1.54e-13 | 62 |
Showing 1 to 10 of 61 entries