FFCP PHASE1:Hg19::chr17:42359003..42359041,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:42359003..42359041,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_at_chr17:42359003..42359041,- | |description=CAGE_peak_at_chr17:42359003..42359041,- | ||
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|ontology_enrichment_celltype=CL:0000764!4.49e-30!2;CL:0000765!4.49e-30!2;CL:0000050!4.49e-30!2;CL:0000038!4.49e-30!2;CL:0000558!4.49e-30!2;CL:0000547!4.49e-30!2;CL:0000549!4.49e-30!2;CL:0000550!4.49e-30!2;CL:0000552!4.49e-30!2 | |ontology_enrichment_celltype=CL:0000764!4.49e-30!2;CL:0000765!4.49e-30!2;CL:0000050!4.49e-30!2;CL:0000038!4.49e-30!2;CL:0000558!4.49e-30!2;CL:0000547!4.49e-30!2;CL:0000549!4.49e-30!2;CL:0000550!4.49e-30!2;CL:0000552!4.49e-30!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.13e-57;2!CL:0000558;1.13e-57;2 | |ontology_enrichment_celltype_v019=CL:0000764;1.13e-57;2!CL:0000558;1.13e-57;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.13e-57,2;CL:0000765,1.13e-57,2;CL:0000050,1.13e-57,2;CL:0000038,1.13e-57,2;CL:0000558,1.13e-57,2;CL:0000547,1.13e-57,2;CL:0000549,1.13e-57,2;CL:0000550,1.13e-57,2;CL:0000552,1.13e-57,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.03e-45!15;UBERON:0000179!1.03e-45!15;UBERON:0000463!1.03e-45!15;UBERON:0007023!2.33e-11!115;UBERON:0000341!3.08e-08!2;UBERON:0002390!4.11e-08!102;UBERON:0003061!4.11e-08!102;UBERON:0002193!2.52e-07!112 | |ontology_enrichment_uberon=UBERON:0000178!1.03e-45!15;UBERON:0000179!1.03e-45!15;UBERON:0000463!1.03e-45!15;UBERON:0007023!2.33e-11!115;UBERON:0000341!3.08e-08!2;UBERON:0002390!4.11e-08!102;UBERON:0003061!4.11e-08!102;UBERON:0002193!2.52e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.33e-30;15!UBERON:0000179;2.33e-30;15!UBERON:0000463;2.33e-30;15!UBERON:0002390;3.12e-14;32!UBERON:0002193;2.86e-09;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.33e-30;15!UBERON:0000179;2.33e-30;15!UBERON:0000463;2.33e-30;15!UBERON:0002390;3.12e-14;32!UBERON:0002193;2.86e-09;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.42e-30,15;UBERON:0000179,2.42e-30,15;UBERON:0000463,2.42e-30,15;UBERON:0007023,3.66e-09,114 | |||
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|short_description=p@chr17:42359003..42359041,- | |short_description=p@chr17:42359003..42359041,- | ||
}} | }} |
Latest revision as of 17:23, 25 July 2015
Short description: | p@chr17:42359003..42359041, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42359003..42359041, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.13e-57 | 2 |
erythroblast | 1.13e-57 | 2 |
megakaryocyte-erythroid progenitor cell | 1.13e-57 | 2 |
erythroid progenitor cell | 1.13e-57 | 2 |
reticulocyte | 1.13e-57 | 2 |
proerythroblast | 1.13e-57 | 2 |
basophilic erythroblast | 1.13e-57 | 2 |
polychromatophilic erythroblast | 1.13e-57 | 2 |
orthochromatic erythroblast | 1.13e-57 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.42e-30 | 15 |
haemolymphatic fluid | 2.42e-30 | 15 |
organism substance | 2.42e-30 | 15 |
adult organism | 3.66e-09 | 114 |