FFCP PHASE1:Hg19::chr17:46720055..46720064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:46720055..46720064,+ | |||
|coexpression_cluster_id=C165 | |coexpression_cluster_id=C165 | ||
|description=CAGE_peak_at_chr17:46720055..46720064,+ | |description=CAGE_peak_at_chr17:46720055..46720064,+ | ||
|id=chr17:46720055..46720064,+ | |id=chr17:46720055..46720064,+ | ||
|ontology_enrichment_celltype=CL:1000449!1.36e-23!16;CL:1000497!7.64e-21!18;CL:0002518!7.64e-21!18;CL:0002579!1.68e-19!3;CL:1000507!4.12e-18!12;CL:1000494!4.12e-18!12;CL:0002681!2.04e-16!13;CL:0002584!2.04e-16!13;CL:0002615!3.82e-09!3;CL:0002334!1.26e-08!12;CL:1000612!1.83e-08!7;CL:1000746!1.83e-08!7;CL:0000666!4.22e-07!4;CL:0002188!4.22e-07!4 | |ontology_enrichment_celltype=CL:1000449!1.36e-23!16;CL:1000497!7.64e-21!18;CL:0002518!7.64e-21!18;CL:0002579!1.68e-19!3;CL:1000507!4.12e-18!12;CL:1000494!4.12e-18!12;CL:0002681!2.04e-16!13;CL:0002584!2.04e-16!13;CL:0002615!3.82e-09!3;CL:0002334!1.26e-08!12;CL:1000612!1.83e-08!7;CL:1000746!1.83e-08!7;CL:0000666!4.22e-07!4;CL:0002188!4.22e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002579;7.01e-25;3!CL:0002334;3.95e-14;12!CL:1000449;1.64e-11;15!CL:1000497;3.13e-10;17!CL:0002518;3.13e-10;17!CL:1000507;3.14e-08;10!CL:1000494;3.14e-08;10!CL:0002615;2.63e-07;3!CL:0002580;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.29e-24,3;CL:0002334,4.13e-14,12;CL:1000449,1.47e-11,15;CL:1000497,2.85e-10,17;CL:0002518,2.85e-10,17;CL:1000507,3.03e-08,10;CL:1000494,3.03e-08,10;CL:0002580,2.05e-07,3;CL:0002615,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!6.59e-08!1;DOID:3111!1.72e-07!1;DOID:3603!1.72e-07!1 | |ontology_enrichment_disease=DOID:6193!6.59e-08!1;DOID:3111!1.72e-07!1;DOID:3603!1.72e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;8.94e-20;1!DOID:3350;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.95e-20,1;DOID:3350,1.43e-10,2 | |||
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|short_description=p@chr17:46720055..46720064,+ | |short_description=p@chr17:46720055..46720064,+ | ||
}} | }} |
Latest revision as of 18:13, 25 July 2015
Short description: | p@chr17:46720055..46720064, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46720055..46720064, + |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.29e-24 | 3 |
preadipocyte | 4.13e-14 | 12 |
epithelial cell of nephron | 1.47e-11 | 15 |
kidney cell | 2.85e-10 | 17 |
kidney epithelial cell | 2.85e-10 | 17 |
kidney tubule cell | 3.03e-08 | 10 |
nephron tubule epithelial cell | 3.03e-08 | 10 |
preadipocyte of the breast | 2.05e-07 | 3 |
adipocyte of omentum tissue | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.64e-27 | 6 |
peritoneum | 3.64e-27 | 6 |
abdominal cavity | 3.64e-27 | 6 |
visceral peritoneum | 3.64e-27 | 6 |
cavity lining | 5.91e-14 | 12 |
serous membrane | 5.91e-14 | 12 |
nephron epithelium | 1.47e-11 | 15 |
renal tubule | 1.47e-11 | 15 |
nephron tubule | 1.47e-11 | 15 |
nephron | 1.47e-11 | 15 |
uriniferous tubule | 1.47e-11 | 15 |
nephrogenic mesenchyme | 1.47e-11 | 15 |
excretory tube | 7.09e-11 | 16 |
kidney epithelium | 7.09e-11 | 16 |
abdominal segment of trunk | 1.19e-10 | 60 |
abdomen | 1.19e-10 | 60 |
nephron tubule epithelium | 3.03e-08 | 10 |
subdivision of trunk | 1.52e-07 | 112 |
kidney | 6.56e-07 | 26 |
kidney mesenchyme | 6.56e-07 | 26 |
upper urinary tract | 6.56e-07 | 26 |
kidney rudiment | 6.56e-07 | 26 |
kidney field | 6.56e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.95e-20 | 1 |
mesenchymal cell neoplasm | 1.43e-10 | 2 |