FFCP PHASE1:Hg19::chr17:46724136..46724151,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=233bp_to_ENST00000433510_5end | |association_with_transcript=233bp_to_ENST00000433510_5end | ||
|cluster_id=chr17:46724136..46724151,- | |||
|coexpression_cluster_id=C3648 | |coexpression_cluster_id=C3648 | ||
|description=CAGE_peak_5_at_ENST00000433510_5end | |description=CAGE_peak_5_at_ENST00000433510_5end |
Latest revision as of 18:13, 25 July 2015
Short description: | p5@ENST00000433510 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000433510_5end |
Coexpression cluster: | C3648_acute_malignant_embryonic_small_transitionalcell_lens_Renal |
Association with transcript: | 233bp_to_ENST00000433510_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@ENST00000433510 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.21e-16 | 10 |
nephron tubule epithelial cell | 2.21e-16 | 10 |
epithelial cell | 5.21e-14 | 253 |
epithelial cell of nephron | 6.66e-14 | 15 |
kidney cell | 4.24e-12 | 17 |
kidney epithelial cell | 4.24e-12 | 17 |
epithelial cell of stomach | 7.07e-11 | 3 |
kidney cortical cell | 4.59e-10 | 12 |
renal cortical epithelial cell | 4.59e-10 | 12 |
transitional epithelial cell | 1.23e-08 | 4 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.21e-16 | 10 |
nephron epithelium | 6.66e-14 | 15 |
renal tubule | 6.66e-14 | 15 |
nephron tubule | 6.66e-14 | 15 |
nephron | 6.66e-14 | 15 |
uriniferous tubule | 6.66e-14 | 15 |
nephrogenic mesenchyme | 6.66e-14 | 15 |
excretory tube | 6.05e-13 | 16 |
kidney epithelium | 6.05e-13 | 16 |
urothelium | 6.47e-12 | 5 |
Showing 1 to 10 of 35 entries
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.86e-17 | 143 |
carcinoma | 1.71e-16 | 106 |
cancer | 3.00e-14 | 235 |
disease of cellular proliferation | 9.40e-14 | 239 |
squamous cell carcinoma | 1.47e-08 | 14 |
gastrointestinal system cancer | 6.39e-08 | 14 |
tubular adenocarcinoma | 1.30e-07 | 2 |
adenocarcinoma | 2.05e-07 | 25 |
Showing 1 to 8 of 8 entries