FFCP PHASE1:Hg19::chr17:48166538..48166569,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48166538..48166569,+ | |||
|description=CAGE_peak_at_chr17:48166538..48166569,+ | |description=CAGE_peak_at_chr17:48166538..48166569,+ | ||
|id=chr17:48166538..48166569,+ | |id=chr17:48166538..48166569,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.03e-31!254;CL:0000220!4.56e-16!246;CL:0002321!6.65e-16!248;CL:0000548!5.94e-13!679;CL:0000004!5.94e-13!679;CL:0000255!5.94e-13!679;CL:0000012!1.79e-12!682;CL:0000076!5.98e-11!62;CL:0000077!5.65e-10!19;CL:0000063!1.11e-09!578;CL:1000497!1.42e-08!18;CL:0002518!1.42e-08!18;CL:0002077!2.42e-08!33;CL:0002076!3.14e-08!43;CL:0000003!3.71e-08!722;CL:1000449!2.36e-07!16;CL:0000144!6.70e-07!625 | |ontology_enrichment_celltype=CL:0000066!4.03e-31!254;CL:0000220!4.56e-16!246;CL:0002321!6.65e-16!248;CL:0000548!5.94e-13!679;CL:0000004!5.94e-13!679;CL:0000255!5.94e-13!679;CL:0000012!1.79e-12!682;CL:0000076!5.98e-11!62;CL:0000077!5.65e-10!19;CL:0000063!1.11e-09!578;CL:1000497!1.42e-08!18;CL:0002518!1.42e-08!18;CL:0002077!2.42e-08!33;CL:0002076!3.14e-08!43;CL:0000003!3.71e-08!722;CL:1000449!2.36e-07!16;CL:0000144!6.70e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.32e-13;17!CL:0002518;1.32e-13;17!CL:1000449;6.36e-11;15!CL:0002076;6.04e-10;42!CL:0002159;1.02e-09;14!CL:0000077;1.25e-09;19!CL:1000507;6.66e-09;10!CL:1000494;6.66e-09;10!CL:0000244;1.18e-08;4!CL:0000731;1.18e-08;4!CL:0002681;6.66e-07;12!CL:0002584;6.66e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.91e-27,253;CL:1000497,1.71e-13,17;CL:0002518,1.71e-13,17;CL:0002076,9.15e-13,42;CL:0002321,1.40e-11,250;CL:1000449,7.65e-11,15;CL:0002159,5.63e-10,14;CL:0000077,1.19e-09,19;CL:0000244,7.18e-09,4;CL:0000731,7.18e-09,4;CL:1000507,8.19e-09,10;CL:1000494,8.19e-09,10;CL:0000223,1.04e-08,58;CL:0000076,1.84e-08,63;CL:0002077,9.85e-08,34;CL:0002681,6.04e-07,12;CL:0002584,6.04e-07,12;CL:0000622,8.82e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.57e-09!27;DOID:193!2.77e-09!29;DOID:2394!6.21e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!1.60e-07!44;UBERON:0004211!2.36e-07!16;UBERON:0001285!2.36e-07!16;UBERON:0007684!2.36e-07!16;UBERON:0003220!2.36e-07!16;UBERON:0004208!2.36e-07!16;UBERON:0001008!4.01e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.52e-12;30!UBERON:0001008;1.52e-12;30!UBERON:0006555;6.36e-11;15!UBERON:0004819;6.36e-11;15!UBERON:0001285;6.36e-11;15!UBERON:0007684;6.36e-11;15!UBERON:0004211;6.66e-09;10!UBERON:0009773;6.66e-09;10!UBERON:0001231;6.66e-09;10!UBERON:0004810;6.66e-09;10!UBERON:0002113;9.30e-09;24!UBERON:0011143;9.30e-09;24!UBERON:0001225;6.66e-07;12!UBERON:0008987;6.66e-07;12!UBERON:0000365;6.99e-07;5!UBERON:0000489;9.18e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,4.01e-11,47;UBERON:0004211,7.65e-11,15;UBERON:0009773,7.65e-11,15;UBERON:0001231,7.65e-11,15;UBERON:0001285,7.65e-11,15;UBERON:0007684,7.65e-11,15;UBERON:0004208,7.65e-11,15;UBERON:0001008,8.89e-11,48;UBERON:0006555,5.10e-10,16;UBERON:0004819,5.10e-10,16;UBERON:0004810,8.19e-09,10;UBERON:0002113,8.47e-08,26;UBERON:0003918,8.47e-08,26;UBERON:0011143,8.47e-08,26;UBERON:0005095,8.47e-08,26;UBERON:0007687,8.47e-08,26;UBERON:0000365,4.74e-07,5;UBERON:0001225,6.04e-07,12;UBERON:0008987,6.04e-07,12 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,2.79120467188971,0,2.11013582582763,0.247532705920093,0.331397375727916,0.672325146451775,1.20538905604795,0,0.487932798790507,0,1.22400414746552,0,0,1.64249310087461,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,0,0,0,1.8072355126695,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0.886917589850256,0.790513071238134,0,2.5500670180478,1.85392221392215,0,0,0.398873881556595,0,0,0,0,0.860234595106124,0,0.56530794192401,0.838998872419812,1.37559020970034,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.25326102332916,0.132409180813219,1.43418310374407,0.354668382198357,0.560677600142307,0,5.67335361359468,0,0.942974704487816,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0.61417158655884,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0.794025282120147,1.25572744982203,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0.37223371266318,0.337552664482532,0.292311015483596,0.504867548488229,0,0.161646056818812,3.19508633264953,0.604512589365842,0,1.15956511897978,1.63647672354501,0.573609190778008,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,3.85944562915731,0,0,0.721879481669586,2.01121560067735,0.842923450390509,2.41011029883482,1.54411561825352,0.653638332277218,1.66089433377768,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,1.54411029268673,5.26801369961403,1.1240175325762,3.21692711717219,3.42577247086559,0.325808305310325,0,4.3299402607582,0.463721619900307,0.117408694235822,0.577465791044295,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,2.35174979478403,1.98485136139341,1.25381931783988,2.61570544662566,0,0,0,0.414656231081544,0,0,0,0.763976851116555,0,0,1.43958489784653,0.600686115687835,0.571652865261156,0.336393253036082,0,0.7333828582095,0.129271715757778,0,0.845302752556,0,1.04007436911366,0.257207374262142,1.41849132023278,0.799266537048298,0.57191197463259,0,0.823240336780769,0.325736184293735,0.355391948742546,0,1.50719688529793,0.871533458600294,1.99945982364114,0,0,0,1.4377491329495,2.29723871668228,0,0.289562613335158,1.84928690295345,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,1.24782516918484,2.3195768543631,0.630809660135739,0.35142424497814,0,0,0,0,0.184369168541703,0.347534457872331,0.587403472388222,1.02943027143257,0,0,0,0,1.66435439510497,0.30239029332968,0,0.306923946576125,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.697262270759755,0,11.228362336984,5.61694032508968,0.114814448164607,0,0.131124414959424,0.902399225814824,2.23344477602803,2.35304930753057,4.38417673959782,1.05551628892876,1.13733384070897,0.510281115829547,0.215915916102139,1.54227252690289,0,4.01351819083883,0.509752546090077,4.98645605357235,1.56712328305525,0,0,0,0,1.30151357865721,0.103041011647722,0,0,2.87132768998086,4.55042172225565,0,0.193341436584244,0.154048617114644,0,0.275673144969061,0,0.435050081742686,0.170453254832202,0,4.46269271474641,1.92190067365106,0.765676274967505,1.11273558941105,1.39453664789186,2.20368642781448,0,1.54016790088044,0,0,0,0.429374660225974,0.372158369359667,0,0.571890581771475,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0.974853958525138,0,0,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0.92947049429925,0.563391205064483,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.422215270595328,0,0.379473173765715,0,1.25088746543166,0,2.17781969722645,0.0941438007767792,3.87454835404107,8.42357378338128,4.43430153536676,1.83778720165568,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0,0.445234820091624,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.306806047506464,0,1.24415835064723,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.7812832832557,0,0,1.137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0,0.41827123283581,0,0.683652335082007,0,0.0897576444097721,0,0,0.732780747214898,1.06606955203727,0,0,0,0,0,0,0,0,1.26598838716816,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0.941798755221676,0,0.284609546029793,0.693373365065693,0.173559738335131,0,0.34823682632161,0,0.171986032471617,0.290268993867255,0.438535902517113,0.574808199372465,0.09698901648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| ||
|short_description=p@chr17:48166538..48166569,+ | |short_description=p@chr17:48166538..48166569,+ | ||
}} | }} |
Latest revision as of 18:27, 25 July 2015
Short description: | p@chr17:48166538..48166569, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48166538..48166569, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.91e-27 | 253 |
kidney cell | 1.71e-13 | 17 |
kidney epithelial cell | 1.71e-13 | 17 |
endo-epithelial cell | 9.15e-13 | 42 |
embryonic cell | 1.40e-11 | 250 |
epithelial cell of nephron | 7.65e-11 | 15 |
general ecto-epithelial cell | 5.63e-10 | 14 |
mesothelial cell | 1.19e-09 | 19 |
transitional epithelial cell | 7.18e-09 | 4 |
urothelial cell | 7.18e-09 | 4 |
kidney tubule cell | 8.19e-09 | 10 |
nephron tubule epithelial cell | 8.19e-09 | 10 |
endodermal cell | 1.04e-08 | 58 |
squamous epithelial cell | 1.84e-08 | 63 |
ecto-epithelial cell | 9.85e-08 | 34 |
kidney cortical cell | 6.04e-07 | 12 |
renal cortical epithelial cell | 6.04e-07 | 12 |
acinar cell | 8.82e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 4.01e-11 | 47 |
nephron epithelium | 7.65e-11 | 15 |
renal tubule | 7.65e-11 | 15 |
nephron tubule | 7.65e-11 | 15 |
nephron | 7.65e-11 | 15 |
uriniferous tubule | 7.65e-11 | 15 |
nephrogenic mesenchyme | 7.65e-11 | 15 |
renal system | 8.89e-11 | 48 |
excretory tube | 5.10e-10 | 16 |
kidney epithelium | 5.10e-10 | 16 |
nephron tubule epithelium | 8.19e-09 | 10 |
kidney | 8.47e-08 | 26 |
kidney mesenchyme | 8.47e-08 | 26 |
upper urinary tract | 8.47e-08 | 26 |
kidney rudiment | 8.47e-08 | 26 |
kidney field | 8.47e-08 | 26 |
urothelium | 4.74e-07 | 5 |
cortex of kidney | 6.04e-07 | 12 |
renal parenchyma | 6.04e-07 | 12 |