FFCP PHASE1:Hg19::chr17:70030407..70030411,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-174bp_to_ENST00000543512_5end | |association_with_transcript=-174bp_to_ENST00000543512_5end | ||
|cluster_id=chr17:70030407..70030411,- | |||
|coexpression_cluster_id=C2984 | |||
|description=CAGE_peak_1_at_ENST00000543512_5end | |description=CAGE_peak_1_at_ENST00000543512_5end | ||
|id=chr17:70030407..70030411,- | |id=chr17:70030407..70030411,- | ||
|ontology_enrichment_celltype=CL:0002195!5.88e-08!2;CL:0002571!5.88e-08!2 | |ontology_enrichment_celltype=CL:0002195!5.88e-08!2;CL:0002571!5.88e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;8.94e-20;1!UBERON:0006298;1.30e-19;1!UBERON:0000358;1.71e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.57e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.57e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.62e-18!115;UBERON:0002020!3.33e-16!34;UBERON:0003528!3.33e-16!34;UBERON:0001049!8.77e-15!57;UBERON:0005068!8.77e-15!57;UBERON:0006241!8.77e-15!57;UBERON:0007135!8.77e-15!57;UBERON:0001017!2.23e-14!82;UBERON:0002791!2.52e-14!33;UBERON:0002616!3.80e-14!59;UBERON:0001893!7.83e-14!34;UBERON:0005743!1.76e-13!86;UBERON:0002308!3.73e-13!9;UBERON:0000125!3.73e-13!9;UBERON:0000955!8.79e-13!69;UBERON:0006238!8.79e-13!69;UBERON:0003080!1.16e-12!42;UBERON:0001869!1.20e-12!32;UBERON:0000073!9.64e-12!94;UBERON:0001016!9.64e-12!94;UBERON:0002780!4.77e-11!41;UBERON:0001890!4.77e-11!41;UBERON:0006240!4.77e-11!41;UBERON:0002298!2.00e-10!8;UBERON:0002346!2.93e-10!90;UBERON:0003075!1.12e-09!86;UBERON:0007284!1.12e-09!86;UBERON:0000924!1.33e-09!173;UBERON:0006601!1.33e-09!173;UBERON:0000153!1.76e-09!129;UBERON:0007811!1.76e-09!129;UBERON:0004121!4.51e-09!169;UBERON:0001829!5.89e-09!2;UBERON:0003127!9.59e-09!2;UBERON:0000341!1.15e-08!2;UBERON:0002619!1.53e-08!22;UBERON:0000033!4.14e-08!123;UBERON:0009663!4.59e-08!7;UBERON:0001875!4.59e-08!2;UBERON:0006514!4.59e-08!2;UBERON:0001870!6.31e-08!2;UBERON:0003056!7.70e-08!61;UBERON:0002148!1.10e-07!2;UBERON:0009662!1.10e-07!2;UBERON:0000956!2.09e-07!25;UBERON:0000203!2.09e-07!25;UBERON:0001950!2.38e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.57e-37;2!UBERON:0003127;1.70e-36;2!UBERON:0001044;7.43e-28;6!UBERON:0003293;7.43e-28;6!UBERON:0003294;7.43e-28;6!UBERON:0010047;7.43e-28;6!UBERON:0003408;7.43e-28;6!UBERON:0000167;7.43e-28;6!UBERON:0001041;3.65e-21;14!UBERON:0001831;8.94e-20;1!UBERON:0001567;8.94e-20;1!UBERON:0001736;1.30e-19;1!UBERON:0007029;3.56e-19;1!UBERON:0003126;3.48e-11;7!UBERON:0001005;3.48e-11;7!UBERON:0004089;1.43e-10;2!UBERON:0000341;1.97e-10;2!UBERON:0000161;2.93e-09;19!UBERON:0000166;2.93e-09;19!UBERON:0004921;4.49e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.57e-37,2;UBERON:0003127,1.70e-36,2;UBERON:0001044,8.52e-28,6;UBERON:0003293,8.52e-28,6;UBERON:0003294,8.52e-28,6;UBERON:0010047,8.52e-28,6;UBERON:0000167,8.52e-28,6;UBERON:0001831,8.95e-20,1;UBERON:0001567,8.95e-20,1;UBERON:0008801,8.95e-20,1;UBERON:0001736,1.30e-19,1;UBERON:0006298,1.30e-19,1;UBERON:0007029,2.25e-19,1;UBERON:0003408,5.55e-17,10;UBERON:0003126,3.48e-11,7;UBERON:0001005,3.48e-11,7;UBERON:0004089,1.43e-10,2;UBERON:0000341,2.07e-10,2;UBERON:0000166,4.66e-08,22;UBERON:0001041,2.45e-07,87 | |||
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| ||
|short_description=p1@ENST00000543512 | |short_description=p1@ENST00000543512 | ||
}} | }} |
Latest revision as of 20:30, 25 July 2015
Short description: | p1@ENST00000543512 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000543512_5end |
Coexpression cluster: | C2984_parotid_duodenum_small_temporal_trachea_colon_tongue |
Association with transcript: | -174bp_to_ENST00000543512_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.57e-37 | 2 |
open tracheal system trachea | 1.70e-36 | 2 |
saliva-secreting gland | 8.52e-28 | 6 |
gland of oral region | 8.52e-28 | 6 |
gland of foregut | 8.52e-28 | 6 |
oral gland | 8.52e-28 | 6 |
oral cavity | 8.52e-28 | 6 |
parotid gland | 8.95e-20 | 1 |
cheek | 8.95e-20 | 1 |
parotid gland primordium | 8.95e-20 | 1 |
submandibular gland | 1.30e-19 | 1 |
submandibular gland primordium | 1.30e-19 | 1 |
surface | 2.25e-19 | 1 |
gland of gut | 5.55e-17 | 10 |
trachea | 3.48e-11 | 7 |
respiratory airway | 3.48e-11 | 7 |
midface | 1.43e-10 | 2 |
throat | 2.07e-10 | 2 |
oral opening | 4.66e-08 | 22 |
foregut | 2.45e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.57e-10 | 2 |