FFCP PHASE1:Hg19::chr17:74610496..74610501,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:74610496..74610501,- | |||
|coexpression_cluster_id=C3683 | |||
|description=CAGE_peak_at_chr17:74610496..74610501,- | |||
|id=chr17:74610496..74610501,- | |||
|ontology_enrichment_celltype=CL:0000623!1.04e-09!3;CL:0000825!1.04e-09!3;CL:0002150!1.45e-09!3;CL:0000861!1.45e-09!3;CL:0002087!2.12e-09!119;CL:0000838!2.31e-09!52;CL:0000037!3.40e-09!172;CL:0000566!3.40e-09!172;CL:0000542!4.10e-09!53;CL:0000051!4.10e-09!53;CL:0000988!6.13e-09!182;CL:0000738!1.43e-08!140;CL:0002032!2.36e-08!165;CL:0000837!2.36e-08!165;CL:0002031!6.62e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000623;8.98e-23;3!CL:0002127;3.16e-18;1!CL:0000911;3.16e-18;1!CL:0000814;3.16e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.20e-23,3;CL:0000825,7.20e-23,3;CL:0002127,3.16e-18,1;CL:0000914,3.16e-18,1;CL:0000911,3.16e-18,1;CL:0000814,3.16e-18,1;CL:0002042,3.16e-18,1;CL:0002039,3.16e-18,1;CL:0002040,3.16e-18,1;CL:0002041,3.16e-18,1;CL:0000893,8.69e-10,2;CL:0002489,8.69e-10,2;CL:0000809,8.69e-10,2;CL:0000808,8.69e-10,2;CL:0000894,8.69e-10,2;CL:0000806,8.69e-10,2;CL:0000807,8.69e-10,2;CL:0000805,8.69e-10,2;CL:0002425,8.69e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002425;8.69e-10;2!UBERON:0009117;1.42e-07;10!UBERON:0005564;1.42e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;4.44e-18;1!DOID:3350;1.03e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.75e-18,1;DOID:3350,9.46e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.01e-09;8!UBERON:0003135;5.81e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.01e-09,8;UBERON:0003135,5.81e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48340575974109,1.18218456121156,1.94064817373566,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.66614393599564,0,0.18714054040822,0,0,2.22886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255605286265,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,5.56196651833622,0.207376382794494,0,0,0,0,0,0,0,0,0,0,2.57979048707425,1.54810130062536,1.38869702463753,0.410577285266046,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.404421263125109,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0.357382720883282,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,1.28823786971007,2.41167717140561,0,0,0,0,0,0.124149428591716,0,0,0,0.435433495793923,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:74610496..74610501,- | |||
}} |
Latest revision as of 21:30, 25 July 2015
Short description: | p@chr17:74610496..74610501, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74610496..74610501, - |
Coexpression cluster: | C3683_embryonic_NK_Natural_Hodgkin_CD8_mesothelioma_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.20e-23 | 3 |
pro-NK cell | 7.20e-23 | 3 |
innate effector T cell | 3.16e-18 | 1 |
immature NK T cell | 3.16e-18 | 1 |
effector T cell | 3.16e-18 | 1 |
mature NK T cell | 3.16e-18 | 1 |
immature NK T cell stage IV | 3.16e-18 | 1 |
immature NK T cell stage I | 3.16e-18 | 1 |
immature NK T cell stage II | 3.16e-18 | 1 |
immature NK T cell stage III | 3.16e-18 | 1 |
thymocyte | 8.69e-10 | 2 |
double negative thymocyte | 8.69e-10 | 2 |
double-positive, alpha-beta thymocyte | 8.69e-10 | 2 |
DN4 thymocyte | 8.69e-10 | 2 |
DN1 thymic pro-T cell | 8.69e-10 | 2 |
DN2 thymocyte | 8.69e-10 | 2 |
DN3 thymocyte | 8.69e-10 | 2 |
immature single positive thymocyte | 8.69e-10 | 2 |
early T lineage precursor | 8.69e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.01e-09 | 8 |
male reproductive organ | 5.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.75e-18 | 1 |
mesenchymal cell neoplasm | 9.46e-10 | 2 |