FFCP PHASE1:Hg19::chr17:79989872..79989885,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:79989872..79989885,+ to FFCP PHASE1:Hg19::chr17:79989872..79989885,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:79989872..79989885,+ | |||
|description=CAGE_peak_at_chr17:79989872..79989885,+ | |||
|id=chr17:79989872..79989885,+ | |||
|ontology_enrichment_celltype=CL:0002321!6.54e-13!248;CL:0000220!3.03e-12!246;CL:0000133!6.93e-12!59;CL:0000333!3.38e-11!41;CL:0000055!1.07e-10!180;CL:0000221!4.38e-10!71;CL:0002319!3.49e-09!25;CL:0000095!2.42e-08!17;CL:0000123!2.42e-08!17;CL:0000147!1.16e-07!14;CL:0000012!2.28e-07!682;CL:0000243!2.77e-07!15;CL:0000125!2.77e-07!15;CL:0000030!2.77e-07!15;CL:0000339!2.77e-07!15;CL:0000128!2.92e-07!7;CL:0000126!2.92e-07!7;CL:0000127!2.92e-07!7;CL:0002453!2.92e-07!7;CL:0000548!3.23e-07!679;CL:0000004!3.23e-07!679;CL:0000255!3.23e-07!679;CL:0000393!9.35e-07!60;CL:0000211!9.35e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.71e-14;6!CL:0000404;7.71e-14;6!CL:0002367;5.22e-11;2!CL:0002319;7.24e-11;25!CL:0002603;1.29e-07;3!CL:0000128;3.86e-07;7!CL:0000126;3.86e-07;7!CL:0000127;3.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.17e-14,6;CL:0000031,7.17e-14,6;CL:0000404,7.17e-14,6;CL:0002367,5.26e-11,2;CL:0002319,9.50e-11,25;CL:0000047,1.98e-10,8;CL:0000133,8.75e-08,59;CL:0002603,1.80e-07,3;CL:0000128,4.83e-07,7;CL:0000126,4.83e-07,7;CL:0000127,4.83e-07,7;CL:0002453,4.83e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;7.71e-14;6 | |||
|ontology_enrichment_disease=DOID:1036!8.90e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.28e-10;8!DOID:8692;3.34e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.47e-10,8;DOID:8692,3.77e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007625!5.82e-08!11;UBERON:0000019!7.95e-08!19;UBERON:0000047!7.95e-08!19;UBERON:0004088!7.95e-08!19;UBERON:0003072!7.95e-08!19;UBERON:0003071!7.95e-08!19;UBERON:0004128!7.95e-08!19;UBERON:0001456!1.02e-07!21;UBERON:0000970!3.23e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;5.22e-11;2!UBERON:0003956;5.22e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,5.26e-11,2;UBERON:0003956,5.26e-11,2 | |||
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| ||
|short_description=p@chr17:79989872..79989885,+ | |||
}} | }} |
Latest revision as of 22:58, 25 July 2015
Short description: | p@chr17:79989872..79989885, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79989872..79989885, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.17e-14 | 6 |
neuroblast | 7.17e-14 | 6 |
electrically signaling cell | 7.17e-14 | 6 |
trabecular meshwork cell | 5.26e-11 | 2 |
neural cell | 9.50e-11 | 25 |
neuronal stem cell | 1.98e-10 | 8 |
neurectodermal cell | 8.75e-08 | 59 |
astrocyte of the cerebellum | 1.80e-07 | 3 |
oligodendrocyte | 4.83e-07 | 7 |
macroglial cell | 4.83e-07 | 7 |
astrocyte | 4.83e-07 | 7 |
oligodendrocyte precursor cell | 4.83e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 5.26e-11 | 2 |
aqueous drainage system | 5.26e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.47e-10 | 8 |
myeloid leukemia | 3.77e-07 | 31 |