FFCP PHASE1:Hg19::chr17:8798137..8798145,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:8798137..8798145,- | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_at_chr17:8798137..8798145,- | |description=CAGE_peak_at_chr17:8798137..8798145,- | ||
|id=chr17:8798137..8798145,- | |id=chr17:8798137..8798145,- | ||
|ontology_enrichment_celltype=CL:0000945!3.98e-23!24;CL:0000826!3.98e-23!24;CL:0000946!5.13e-23!1;CL:0000786!5.13e-23!1;CL:0000980!5.13e-23!1;CL:0000785!3.24e-12!2;CL:0000955!3.24e-12!2;CL:0000818!3.24e-12!2;CL:0000954!3.24e-12!2;CL:0000816!3.24e-12!2;CL:0000838!8.41e-11!52;CL:0000542!1.34e-10!53;CL:0000051!1.34e-10!53;CL:0000817!1.40e-08!3 | |ontology_enrichment_celltype=CL:0000945!3.98e-23!24;CL:0000826!3.98e-23!24;CL:0000946!5.13e-23!1;CL:0000786!5.13e-23!1;CL:0000980!5.13e-23!1;CL:0000785!3.24e-12!2;CL:0000955!3.24e-12!2;CL:0000818!3.24e-12!2;CL:0000954!3.24e-12!2;CL:0000816!3.24e-12!2;CL:0000838!8.41e-11!52;CL:0000542!1.34e-10!53;CL:0000051!1.34e-10!53;CL:0000817!1.40e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.06e-19;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.27e-19,24;CL:0000826,2.27e-19,24;CL:0000838,1.89e-09,52;CL:0000542,2.74e-09,53;CL:0000051,2.74e-09,53 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.11e-08;7 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!8.31e-09!3;UBERON:0004854!8.31e-09!3;UBERON:0009034!8.31e-09!3;UBERON:0002095!8.31e-09!3;UBERON:0004782!8.31e-09!3;UBERON:0003281!8.31e-09!3;UBERON:0009664!8.31e-09!3;UBERON:0002296!8.31e-09!3;UBERON:0005602!8.31e-09!3;UBERON:0001179!8.31e-09!3;UBERON:0006293!8.31e-09!3 | |ontology_enrichment_uberon=UBERON:0002106!8.31e-09!3;UBERON:0004854!8.31e-09!3;UBERON:0009034!8.31e-09!3;UBERON:0002095!8.31e-09!3;UBERON:0004782!8.31e-09!3;UBERON:0003281!8.31e-09!3;UBERON:0009664!8.31e-09!3;UBERON:0002296!8.31e-09!3;UBERON:0005602!8.31e-09!3;UBERON:0001179!8.31e-09!3;UBERON:0006293!8.31e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.69e-18;3!UBERON:0004177;3.10e-11;5!UBERON:0005057;3.10e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.76e-18,3;UBERON:0004854,6.76e-18,3;UBERON:0009034,6.76e-18,3;UBERON:0002095,6.76e-18,3;UBERON:0004782,6.76e-18,3;UBERON:0003281,6.76e-18,3;UBERON:0009664,6.76e-18,3;UBERON:0002296,6.76e-18,3;UBERON:0005602,6.76e-18,3;UBERON:0001179,6.76e-18,3;UBERON:0006293,6.76e-18,3;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8 | |||
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|short_description=p@chr17:8798137..8798145,- | |short_description=p@chr17:8798137..8798145,- | ||
}} | }} |
Latest revision as of 23:24, 25 July 2015
Short description: | p@chr17:8798137..8798145, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8798137..8798145, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.27e-19 | 24 |
pro-B cell | 2.27e-19 | 24 |
lymphoid lineage restricted progenitor cell | 1.89e-09 | 52 |
lymphocyte | 2.74e-09 | 53 |
common lymphoid progenitor | 2.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.76e-18 | 3 |
gastrointestinal system mesentery | 6.76e-18 | 3 |
stomach region | 6.76e-18 | 3 |
mesentery | 6.76e-18 | 3 |
gastrointestinal system serosa | 6.76e-18 | 3 |
mesentery of stomach | 6.76e-18 | 3 |
gut mesentery | 6.76e-18 | 3 |
dorsal mesentery | 6.76e-18 | 3 |
dorsal mesogastrium | 6.76e-18 | 3 |
peritoneal cavity | 6.76e-18 | 3 |
spleen primordium | 6.76e-18 | 3 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |