FFCP PHASE1:Hg19::chr18:22853181..22853185,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:22853181..22853185,- | |||
|description=CAGE_peak_at_chr18:22853181..22853185,- | |||
|id=chr18:22853181..22853185,- | |||
|ontology_enrichment_celltype=CL:0005020!7.30e-07!6;CL:0002138!7.30e-07!6;CL:0005022!7.30e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002618;3.50e-16;3!CL:0002138;1.68e-13;6!CL:0002139;2.00e-09;24!CL:0002543;2.57e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,1.45e-16,3;CL:0005020,1.61e-13,6;CL:0002138,1.61e-13,6;CL:0005022,1.61e-13,6;CL:0002139,1.56e-09,24;CL:0002543,1.67e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.89e-16;3!CL:0005022;1.68e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.95e-19!115;UBERON:0001049!5.95e-13!57;UBERON:0005068!5.95e-13!57;UBERON:0006241!5.95e-13!57;UBERON:0007135!5.95e-13!57;UBERON:0002346!3.01e-12!90;UBERON:0002616!4.94e-12!59;UBERON:0003075!1.77e-11!86;UBERON:0007284!1.77e-11!86;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0001893!4.17e-10!34;UBERON:0005743!5.18e-10!86;UBERON:0001017!8.51e-10!82;UBERON:0002791!9.86e-10!33;UBERON:0002780!9.91e-10!41;UBERON:0001890!9.91e-10!41;UBERON:0006240!9.91e-10!41;UBERON:0003080!2.67e-09!42;UBERON:0001869!4.96e-09!32;UBERON:0000073!5.63e-09!94;UBERON:0001016!5.63e-09!94;UBERON:0000955!7.36e-09!69;UBERON:0006238!7.36e-09!69;UBERON:0000924!1.42e-08!173;UBERON:0006601!1.42e-08!173;UBERON:0000153!1.66e-08!129;UBERON:0007811!1.66e-08!129;UBERON:0000477!2.58e-08!286;UBERON:0000033!4.90e-08!123;UBERON:0004121!5.70e-08!169;UBERON:0000956!2.16e-07!25;UBERON:0000203!2.16e-07!25;UBERON:0002619!2.48e-07!22;UBERON:0003056!3.50e-07!61;UBERON:0004111!5.50e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.75e-10;8!UBERON:0004536;3.75e-10;8!UBERON:0006558;3.75e-10;8!UBERON:0002066;6.75e-10;5!UBERON:0002465;3.89e-08;10!UBERON:0002037;4.04e-08;6!UBERON:0003978;1.92e-07;3!UBERON:0000946;1.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.64e-10,8;UBERON:0004536,3.64e-10,8;UBERON:0006558,3.64e-10,8;UBERON:0002066,4.01e-10,5;UBERON:0002465,3.81e-08,10;UBERON:0002037,4.59e-08,6;UBERON:0006215,4.59e-08,6;UBERON:0003978,1.64e-07,3;UBERON:0009751,1.64e-07,3;UBERON:0000946,1.64e-07,3;UBERON:0002523,1.64e-07,3;UBERON:0005983,1.64e-07,3;UBERON:0002165,1.64e-07,3;UBERON:0002062,1.64e-07,3;UBERON:0007280,1.64e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,1.5905718941022,0.486634870302636,0.189069634328136,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03366703667732,2.84613010149368,1.67360306382335,0,0,0.24406205754817,0.735326160691737,0.81014194788176,1.96459402224975,2.69435247151404,3.15312145353302,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0.622422070799533,0.538842688278752,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0.561803226808994,0.408308342509787,0.122834317311768,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0.505008341862199,0.875829639103749,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0.772921620136887,0,0.337552664482532,0,0.757301322732344,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.288732895522148,1.38895653772983,0.951270761172991,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.792435906119034,0.414656231081544,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,1.02738161275192,0.179060963239896,0,0,0,0,0.76228387266739,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0.412164046590889,0,0,0,0,0,0.193341436584244,0,0.460511024178389,0.964856007391714,1.28904293841928,0.435050081742686,0.170453254832202,0.356128142586949,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,1.48171507906718,0,0.280797178113459,0,0,0,1.01575066680962,0,0,1.70338495076131,0,1.22896305723383,0.447352215784832,1.00109485027145,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.874813840149763,0.173624994933292,0,0.60298219312704,1.52581736317083,4.09143261745531,1.18219047581419,0,0,0,0.538651809526579,0,0,0.0897576444097721,0,0,0,0,0,0,0.831058409500782,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0.123563938946503,0,0.269604531922708,1.60515529459758,0.234264445725339,0,0,0,1.18375320854817,2.41981432097328,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.193978032976839,0.970817393606503,0,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.547621515567972,0,0,0,1.11712960508902,1.83328339209347,0.717873024576814,0.399358000997982,1.28767814440971,0.223171457441873,1.2764859772478,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.262272940674991,0,0,0,2.1440859791201,0,0,0,0,0,0,1.55975789423744,0.170388021785422,0,0,2.65013777824443,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.3755727921195,0,0.887432412294818,0.993542447062135,0,0,0,0,0,0,0,0,0,1.10961172300523,0,0,0.889811221596536,0,0,0.310874401165561,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0.314531883711793,0,0,0.637724760305049,0.123935764259002,0,0.318004350653419,0,0,0,0,0.513833800771676,1.41696576325585,0.159633859057151,0.41023272848151,0.504143392443436,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,0.40341013740704,0.781514011233092,0,0,0,0.202612753855184,0,0.413373593002368,0.126831620387814,1.64092442705466,0,0.992422356778588,0.175871244359621,0,0,0,0,0.455324382702595,0,0,0,0.611727596791485,0.0657727735628491,0,0,0.078493092850514,0.314231179832004,0,0.913158720509496,0,0.47775168788705,0.428859265059938,0,0.23248285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| |||
|short_description=p@chr18:22853181..22853185,- | |||
}} |
Latest revision as of 00:05, 26 July 2015
Short description: | p@chr18:22853181..22853185, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:22853181..22853185, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 1.45e-16 | 3 |
lymphangioblast | 1.61e-13 | 6 |
endothelial cell of lymphatic vessel | 1.61e-13 | 6 |
vascular lymphangioblast | 1.61e-13 | 6 |
endothelial cell of vascular tree | 1.56e-09 | 24 |
vein endothelial cell | 1.67e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.64e-10 | 8 |
lymph vasculature | 3.64e-10 | 8 |
lymphatic part of lymphoid system | 3.64e-10 | 8 |
umbilical vein | 4.01e-10 | 5 |
lymphoid system | 3.81e-08 | 10 |
cerebellum | 4.59e-08 | 6 |
rhombic lip | 4.59e-08 | 6 |
valve | 1.64e-07 | 3 |
cardiac mesenchyme | 1.64e-07 | 3 |
cardial valve | 1.64e-07 | 3 |
tunica intima | 1.64e-07 | 3 |
heart layer | 1.64e-07 | 3 |
endocardium | 1.64e-07 | 3 |
endocardial cushion | 1.64e-07 | 3 |
presumptive endocardium | 1.64e-07 | 3 |