FFCP PHASE1:Hg19::chr18:25501555..25501577,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:25501555..25501577,+ | |||
|coexpression_cluster_id=C886 | |||
|description=CAGE_peak_at_chr18:25501555..25501577,+ | |||
|id=chr18:25501555..25501577,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.19e-18!254;CL:0000076!7.54e-10!62;CL:0000077!2.28e-09!19;CL:0000128!2.10e-08!7;CL:0000126!2.10e-08!7;CL:0000127!2.10e-08!7;CL:0002453!2.10e-08!7;CL:0000243!7.64e-08!15;CL:0000125!7.64e-08!15;CL:0000030!7.64e-08!15;CL:0000339!7.64e-08!15;CL:0000221!1.61e-07!71;CL:0002319!3.03e-07!25;CL:0002159!5.30e-07!13;CL:0000095!9.11e-07!17;CL:0000123!9.11e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000575;4.49e-17;2!CL:0002605;1.06e-11;3!CL:0000128;7.57e-11;7!CL:0000126;7.57e-11;7!CL:0000127;7.57e-11;7!CL:0000243;1.11e-07;15!CL:0000125;1.11e-07;15!CL:0000095;6.94e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.07e-17,2;CL:0002605,8.83e-12,3;CL:0000128,8.24e-11,7;CL:0000126,8.24e-11,7;CL:0000127,8.24e-11,7;CL:0002453,8.24e-11,7;CL:0000243,1.12e-07,15;CL:0000125,1.12e-07,15;CL:0000030,1.12e-07,15;CL:0000339,1.12e-07,15;CL:0000095,7.00e-07,17;CL:0000123,7.00e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;1.11e-07;15!UBERON:0007123;2.32e-07;5 | |||
|ontology_enrichment_disease=DOID:0050687!4.09e-19!143;DOID:305!6.34e-18!106;DOID:162!3.14e-15!235;DOID:14566!1.66e-14!239 | |||
|ontology_enrichment_disease_v019=DOID:3112;3.25e-09;1!DOID:6193;3.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.55e-09,1;DOID:3112,4.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.64e-14!9;UBERON:0000033!2.28e-07!123;UBERON:0000153!3.47e-07!129;UBERON:0007811!3.47e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000964;5.40e-09;4!UBERON:0010409;5.40e-09;4!UBERON:0002046;2.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,3.68e-09,4;UBERON:0010409,3.68e-09,4;UBERON:0004348,3.68e-09,4;UBERON:0005427,3.68e-09,4;UBERON:0002046,2.51e-07,5;UBERON:0004117,2.51e-07,5;UBERON:0007689,2.51e-07,5;UBERON:0007123,2.51e-07,5;UBERON:0003091,2.51e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0,1.43117993565528,2.18999080116615,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0,1.82147644146271,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,1.18306800039844,0.674338760312407,0.723033089650446,0.55146986366197,0.435758888184812,1.18635309555548,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,1.13420077793909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0.247528499761764,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.562677665642051,0.222617410045812,0,0,0,0,0,1.1249555075237,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0.867798691675654,0.391969589657511,0.522355239482415,0,1.37588825977293,0,0.511625219603299,0.164230914106418,0.193978032976839,0,0,0.685209623233754,0.19871461170299,0.0633107959558787,0,0.721429382263803,0,0.19980960958213,0,3.77970767347522,0,0,0.745515213392595,0,0.815425236441684,1.255234155748,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0.105600336519406,0,18.2319437453473,0,0,0,0,0,0,2.39460383124975,0,0,0.453248366080503,0,0,0,0,0.171086837884329,1.40963004463334,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0.770479321629213,0,0.782982875895635,0.906823702049089,0.926089897295336,0,1.25362188757041,0,2.19284049578707,0.176689145945881,0,0.168942440653073,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0.132864840313363,0,0.327609848846413,0.245772908753719,0.633936370075881,0,0,0,3.97261167496785,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0,0,0.231051332300676,0,0,0,0,0,0,0,1.14640342257068,0.739280431085226,0,0,0,0,0.546974809018219,0,0,0,0.255524855279191,0,0.336283722218824,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0.333694205676207,0,0.157115589916002,0,0,0.431855182437243,0,0.142953088353313,0,1.16241425368125,0,0,0,0,0,0,0,0,0,2.06196181689645,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.218531143927391,0.380095503034311,0,0,0,0,0,0,0,0.310298987585686,0.426467963801962,0,0,0,2.24263725161227,0,0,0,0,0,0,0,0.814032686109745,0.533636729388577,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr18:25501555..25501577,+ | |||
}} |
Latest revision as of 00:12, 26 July 2015
Short description: | p@chr18:25501555..25501577, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:25501555..25501577, + |
Coexpression cluster: | C886_large_endometrial_Fibroblast_renal_hepatoblastoma_hepatocellular_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.07e-17 | 2 |
astrocyte of the cerebral cortex | 8.83e-12 | 3 |
oligodendrocyte | 8.24e-11 | 7 |
macroglial cell | 8.24e-11 | 7 |
astrocyte | 8.24e-11 | 7 |
oligodendrocyte precursor cell | 8.24e-11 | 7 |
glial cell (sensu Vertebrata) | 1.12e-07 | 15 |
glial cell | 1.12e-07 | 15 |
glioblast | 1.12e-07 | 15 |
glioblast (sensu Vertebrata) | 1.12e-07 | 15 |
neuron associated cell | 7.00e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 7.00e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cornea | 3.68e-09 | 4 |
eye surface | 3.68e-09 | 4 |
optic eminence | 3.68e-09 | 4 |
corneal primordium | 3.68e-09 | 4 |
thyroid gland | 2.51e-07 | 5 |
pharyngeal pouch | 2.51e-07 | 5 |
thyroid diverticulum | 2.51e-07 | 5 |
pharyngeal pouch 2 | 2.51e-07 | 5 |
thyroid primordium | 2.51e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.55e-09 | 1 |
papillary adenocarcinoma | 4.15e-09 | 1 |