FFCP PHASE1:Hg19::chr18:29006892..29006902,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:29006892..29006902,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr18:29006892..29006902,- | |description=CAGE_peak_at_chr18:29006892..29006902,- | ||
|id=chr18:29006892..29006902,- | |id=chr18:29006892..29006902,- | ||
|ontology_enrichment_celltype=CL:0002623!9.80e-16!3;CL:0000622!8.13e-10!5;CL:0000154!2.52e-08!6 | |ontology_enrichment_celltype=CL:0002623!9.80e-16!3;CL:0000622!8.13e-10!5;CL:0000154!2.52e-08!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.84e-34;1!UBERON:0008814;6.48e-18;2!UBERON:0010056;6.48e-18;2 | |||
|ontology_enrichment_disease=DOID:3151!1.96e-12!1;DOID:3149!1.96e-12!1;DOID:3451!7.61e-07!2;DOID:4159!7.61e-07!2;DOID:0060122!7.61e-07!2 | |ontology_enrichment_disease=DOID:3151!1.96e-12!1;DOID:3149!1.96e-12!1;DOID:3451!7.61e-07!2;DOID:4159!7.61e-07!2;DOID:0060122!7.61e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4362;7.01e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,7.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000166!8.46e-19!21;UBERON:0001042!3.42e-18!10;UBERON:0009145!3.42e-18!10;UBERON:0006562!1.45e-16!11;UBERON:0001723!3.18e-16!3;UBERON:0001033!3.18e-16!3;UBERON:0010056!3.18e-16!3;UBERON:0000078!1.43e-15!18;UBERON:0000165!5.11e-14!28;UBERON:0000930!5.11e-14!28;UBERON:0002372!1.11e-12!1;UBERON:0001961!1.11e-12!1;UBERON:0001744!1.11e-12!1;UBERON:0001735!1.11e-12!1;UBERON:0000989!2.46e-12!1;UBERON:0008811!2.46e-12!1;UBERON:0006258!2.46e-12!1;UBERON:0005876!2.46e-12!1;UBERON:0004874!2.46e-12!1;UBERON:0000161!3.84e-11!35;UBERON:0003408!1.90e-10!10;UBERON:0001557!1.09e-09!19;UBERON:0001004!5.86e-09!72;UBERON:0001044!2.52e-08!6;UBERON:0003293!2.52e-08!6;UBERON:0003294!2.52e-08!6;UBERON:0010047!2.52e-08!6;UBERON:0000167!2.52e-08!6;UBERON:0000002!2.71e-08!6;UBERON:0001560!2.71e-08!6;UBERON:0001444!5.14e-08!48;UBERON:0008814!2.83e-07!15;UBERON:0000341!5.41e-07!2;UBERON:0003127!9.54e-07!2 | |ontology_enrichment_uberon=UBERON:0000166!8.46e-19!21;UBERON:0001042!3.42e-18!10;UBERON:0009145!3.42e-18!10;UBERON:0006562!1.45e-16!11;UBERON:0001723!3.18e-16!3;UBERON:0001033!3.18e-16!3;UBERON:0010056!3.18e-16!3;UBERON:0000078!1.43e-15!18;UBERON:0000165!5.11e-14!28;UBERON:0000930!5.11e-14!28;UBERON:0002372!1.11e-12!1;UBERON:0001961!1.11e-12!1;UBERON:0001744!1.11e-12!1;UBERON:0001735!1.11e-12!1;UBERON:0000989!2.46e-12!1;UBERON:0008811!2.46e-12!1;UBERON:0006258!2.46e-12!1;UBERON:0005876!2.46e-12!1;UBERON:0004874!2.46e-12!1;UBERON:0000161!3.84e-11!35;UBERON:0003408!1.90e-10!10;UBERON:0001557!1.09e-09!19;UBERON:0001004!5.86e-09!72;UBERON:0001044!2.52e-08!6;UBERON:0003293!2.52e-08!6;UBERON:0003294!2.52e-08!6;UBERON:0010047!2.52e-08!6;UBERON:0000167!2.52e-08!6;UBERON:0000002!2.71e-08!6;UBERON:0001560!2.71e-08!6;UBERON:0001444!5.14e-08!48;UBERON:0008814!2.83e-07!15;UBERON:0000341!5.41e-07!2;UBERON:0003127!9.54e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;7.81e-45;3!UBERON:0001033;7.81e-45;3!UBERON:0002372;7.06e-34;1!UBERON:0001961;7.06e-34;1!UBERON:0001744;7.06e-34;1!UBERON:0001042;7.06e-34;1!UBERON:0001735;7.06e-34;1!UBERON:0000341;1.07e-17;2!UBERON:0006562;1.07e-17;2!UBERON:0001043;1.85e-12;3!UBERON:0000165;2.21e-11;28!UBERON:0000002;8.97e-07;6!UBERON:0000974;8.97e-07;6!UBERON:0001560;8.97e-07;6!UBERON:0000020;9.39e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,7.81e-45,3;UBERON:0001033,7.81e-45,3;UBERON:0010056,7.81e-45,3;UBERON:0002372,7.06e-34,1;UBERON:0001961,7.06e-34,1;UBERON:0001744,7.06e-34,1;UBERON:0001735,7.06e-34,1;UBERON:0001042,2.51e-30,10;UBERON:0009145,2.51e-30,10;UBERON:0006562,1.17e-27,11;UBERON:0000341,9.07e-18,2;UBERON:0001557,2.16e-16,19;UBERON:0000166,2.85e-14,22;UBERON:0001043,1.85e-12,3;UBERON:0009143,1.85e-12,3;UBERON:0000165,5.14e-11,29;UBERON:0000930,5.14e-11,29;UBERON:0000153,4.34e-09,62;UBERON:0007811,4.34e-09,62;UBERON:0000161,5.14e-09,36;UBERON:0008814,2.25e-08,18;UBERON:0000072,4.59e-07,47;UBERON:0001444,8.40e-07,49;UBERON:0000002,9.49e-07,6;UBERON:0001560,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23740689037465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,0,0,0.124149428591716,0,0,0,3.48346796635138,2.73786640868225,1.54909721933551,0.286888821570705,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23740689037465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,0,0,0.124149428591716,0,0,0,3.48346796635138,2.73786640868225,1.54909721933551,0.286888821570705,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr18:29006892..29006902,- | |short_description=p@chr18:29006892..29006902,- | ||
}} | }} |
Latest revision as of 00:19, 26 July 2015
Short description: | p@chr18:29006892..29006902, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:29006892..29006902, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 7.81e-45 | 3 |
gustatory system | 7.81e-45 | 3 |
future tongue | 7.81e-45 | 3 |
tonsil | 7.06e-34 | 1 |
mucosa-associated lymphoid tissue | 7.06e-34 | 1 |
lymphoid tissue | 7.06e-34 | 1 |
tonsillar ring | 7.06e-34 | 1 |
chordate pharynx | 2.51e-30 | 10 |
pharyngeal region of foregut | 2.51e-30 | 10 |
pharynx | 1.17e-27 | 11 |
throat | 9.07e-18 | 2 |
upper respiratory tract | 2.16e-16 | 19 |
oral opening | 2.85e-14 | 22 |
esophagus | 1.85e-12 | 3 |
esophageal region | 1.85e-12 | 3 |
mouth | 5.14e-11 | 29 |
stomodeum | 5.14e-11 | 29 |
anterior region of body | 4.34e-09 | 62 |
craniocervical region | 4.34e-09 | 62 |
orifice | 5.14e-09 | 36 |
pharyngeal arch system | 2.25e-08 | 18 |
segment of respiratory tract | 4.59e-07 | 47 |
subdivision of head | 8.40e-07 | 49 |
uterine cervix | 9.49e-07 | 6 |
neck of organ | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 7.49e-08 | 5 |