FFCP PHASE1:Hg19::chr18:44812072..44812081,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_uc002lcx.2_5end | |association_with_transcript=-13bp_to_uc002lcx.2_5end | ||
|cluster_id=chr18:44812072..44812081,+ | |||
|coexpression_cluster_id=C1441 | |coexpression_cluster_id=C1441 | ||
|description=CAGE_peak_1_at_uc002lcx.2_5end | |description=CAGE_peak_1_at_uc002lcx.2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!3.09e-13!24;CL:0000826!3.09e-13!24;CL:0000542!3.98e-09!53;CL:0000051!3.98e-09!53;CL:0000838!2.20e-07!52 | |ontology_enrichment_celltype=CL:0000945!3.09e-13!24;CL:0000826!3.09e-13!24;CL:0000542!3.98e-09!53;CL:0000051!3.98e-09!53;CL:0000838!2.20e-07!52 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1115!1.12e-08!20;DOID:2355!1.13e-08!1;DOID:4960!1.22e-08!1;DOID:0070004!1.22e-08!1;DOID:6193!1.52e-08!1;DOID:0060085!2.17e-08!1;DOID:3165!2.17e-08!1;DOID:0060121!2.17e-08!1;DOID:2438!2.17e-08!1;DOID:4418!2.17e-08!1;DOID:12603!3.57e-08!1;DOID:162!5.85e-07!235;DOID:14566!9.72e-07!239 | |ontology_enrichment_disease=DOID:1115!1.12e-08!20;DOID:2355!1.13e-08!1;DOID:4960!1.22e-08!1;DOID:0070004!1.22e-08!1;DOID:6193!1.52e-08!1;DOID:0060085!2.17e-08!1;DOID:3165!2.17e-08!1;DOID:0060121!2.17e-08!1;DOID:2438!2.17e-08!1;DOID:4418!2.17e-08!1;DOID:12603!3.57e-08!1;DOID:162!5.85e-07!235;DOID:14566!9.72e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.33e-29;1!DOID:4960;1.78e-29;1!DOID:0070004;1.78e-29;1!DOID:6193;4.20e-29;1!DOID:74;1.54e-15;2!DOID:3350;2.74e-15;2!DOID:1287;1.96e-08;4 | |ontology_enrichment_disease_v019=DOID:2355;1.33e-29;1!DOID:4960;1.78e-29;1!DOID:0070004;1.78e-29;1!DOID:6193;4.20e-29;1!DOID:74;1.54e-15;2!DOID:3350;2.74e-15;2!DOID:1287;1.96e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,1.33e-29,1;DOID:4960,1.78e-29,1;DOID:0070004,1.78e-29,1;DOID:6193,4.20e-29,1;DOID:74,1.54e-15,2;DOID:3350,2.74e-15,2;DOID:1287,1.96e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002372!4.11e-08!1;UBERON:0001961!4.11e-08!1;UBERON:0001744!4.11e-08!1;UBERON:0001735!4.11e-08!1 | |ontology_enrichment_uberon=UBERON:0002372!4.11e-08!1;UBERON:0001961!4.11e-08!1;UBERON:0001744!4.11e-08!1;UBERON:0001735!4.11e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.26e-08;4!UBERON:0000923;2.26e-08;4!UBERON:0010316;2.26e-08;4!UBERON:0005291;2.26e-08;4!UBERON:0002050;6.04e-07;5!UBERON:0005423;6.04e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002346;2.26e-08;4!UBERON:0000923;2.26e-08;4!UBERON:0010316;2.26e-08;4!UBERON:0005291;2.26e-08;4!UBERON:0002050;6.04e-07;5!UBERON:0005423;6.04e-07;5 | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@uc002lcx.2 | |short_description=p1@uc002lcx.2 | ||
}} | }} |
Latest revision as of 01:05, 26 July 2015
Short description: | p1@uc002lcx.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002lcx.2_5end |
Coexpression cluster: | C1441_fibrosarcoma_hereditary_lymphangiectasia_adult_bronchioalveolar_myeloma_colon |
Association with transcript: | -13bp_to_uc002lcx.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anemia | 1.33e-29 | 1 |
bone marrow cancer | 1.78e-29 | 1 |
myeloma | 1.78e-29 | 1 |
epithelioid sarcoma | 4.20e-29 | 1 |
hematopoietic system disease | 1.54e-15 | 2 |
mesenchymal cell neoplasm | 2.74e-15 | 2 |
cardiovascular system disease | 1.96e-08 | 4 |