FFCP PHASE1:Hg19::chr18:56822974..56823004,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:56822974..56823004,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr18:56822974..56823004,- | |description=CAGE_peak_at_chr18:56822974..56823004,- | ||
|id=chr18:56822974..56823004,- | |id=chr18:56822974..56823004,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;8.70e-08;6!CL:0000404;8.70e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.01e-07,6;CL:0000031,1.01e-07,6;CL:0000404,1.01e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;8.70e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.40e-15;3!DOID:127;5.40e-15;3!DOID:0060072;2.26e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.60e-15,3;DOID:127,7.60e-15,3;DOID:0060072,2.91e-11,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;5.30e-07;17 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0.893922188854576,0.872338524100369,2.53299878168311,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0.286235987131057,0.684372125364421,0.251085279189606,0.0764134057479513,0.410502947249729,0.236132343941038,0,0,0,0,0,0.739508020333575,0.154934401160603,0.426507697462265,0,0.553995408531877,0,0,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0.852449501065388,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0.628975936525128,0.336985893439485,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,1.90810750907073,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0,0.443067789167242,0.270803863765016,0.768547918354051,1.1705341280389,0.493313713811028,0.552700035571697,0,0.14828656316206,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0.476981248610684,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0.560677600142307,0,0.24666754841716,0,0.538842688278752,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0.280901613404497,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0.340296549480063,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0.928735856063958,0,0.354920400119532,0.337169380156203,0.241011029883482,0.441175890929576,0.871517776369625,0.237270619111097,0.539325232640658,0.784885860501384,0,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0.441463099414651,0,0.171567810298526,0,0,0.502644862058154,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.570762456703795,0,0,0.492434012174795,0,0.594524649154913,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0,0,0.380987365753014,0,0,0,0.411309970813294,0,0,0,0,0.07333828582095,0.517086863031111,0,0.845302752556,0.26593811658487,0,0,0,0.799266537048298,0,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0.199945982364114,2.43247561282381,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.672510863961164,0.394061520403854,0.431255149719035,0,0,0,3.09315525111078,0.167516265334349,1.27587750330633,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,2.0694614258501,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0,0.229628896329213,0.546273504020151,0,0,0.15403067420883,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.309123034943167,0.54941678891006,0.495056999523528,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.307007349452259,0.551346289938122,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0.384380134730212,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.54907405947211,0,0,0,0.421258456238981,0.48763373908959,0,1.05650146756755,0,0.282810863907425,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0,0,0,0.196498082026242,0,0,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0.490080431962063,1.30062222588003,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0.684704037099577,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.485442086998054,0.66866030566487,1.13654458722565,0,0,0,0,0.140669416410513,0.333926115068718,0.16480387422676,0.211125408127993,0.19924798825107,0,2.77126022639704,0.102268682502155,0.123084805461069,0,0,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0.341380344856499,0,0.236387681767936,0.689486746482929,2.91604613383254,0.347249989866585,0,0.361789315876224,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0,0.0769502585037971,0.227884111694002,0.23056390438806,0,0,0,0.183195186803725,0,2.04386596391473,0,0.166211681900156,0,0,0,0,0,0.843992258112108,0.163232808159148,0,0.216388639742091,0,0.265372693510018,0.611030144933625,0.593042257361244,0.741383633679017,1.56632924258183,0.067401132980677,0,1.40558667435203,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0.61214552326098,0.126373159256976,0.150323419414493,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0.51595809741485,0.290268993867255,0.146178634172371,0.246346371159628,0,0,0.677942222341597,0.137041924646751,0.397429223405979,0.316553979779393,0,0.160317640503067,0.213452994739353,0.39961921916426,0,0,1.54435498075768,0.288109595976299,0.124252535565433,0,0,0.209205692624666,0,0,0.600420288709789,0.273810757783986,0,0,1.31443677139657,0,0,0,0.399358000997982,0,0,0,0,0,0.393915911536118,0.412079291905832,0.471824806979294,0.295282444544246,0.423366660328922,0,0.136203406111576,0.321506296930038,0.275078873194468,1.24632101408756,0.449947783103001,0,0.0607495566580247,1.0063040627978,0.157611414598396,0.0524545881349981,0.211200673038813,0.537862017998534,0.191915197319445,0,0,0,1.08599920350743,2.5926644736038,1.30634944043764,0,0.164185041498678,0.340776043570843,0.113312091520126,0.293104467356165,0,0.129282956361551,1.3223260174269,0.513260513652988,0,0,0,0,0.992332043623902,4.34745590175477,0.974340787047167,0,0,0,0.306345576763462,0,0,0.886068179966986,0,0,0,0.221858103073705,0.372578417648301,0,0.37494122388632,0.454947352624943,0,0.941063278792687,1.87333962322753,0.869526171664951,0.447764408660622,0,0,0.189403005275089,0,0,1.14420034198462,0,0,0.147855149989634,0.318593534327405,0.449803112163605,0.310525913752519,0,0.797525143673985,0,0,0,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0,0,0,0.214441591374926,0,0.453411851024545,0,0,0,0.308801447160972,0,0,0.578742114812744,0,0,0.690860683462397,0,0,0,0.132864840313363,0,0.327609848846413,0,0.422624246717254,2.19986135440423,0.213383459388282,0.861074898304078,0,0,0.559518030877778,0,0,0.107824811396682,6.91970144165944,0,1.01839517972415,0.212574920101683,0.495743057036009,0,0,0,1.60114149657094,0.352675943690684,0.6124909547064,0.513833800771676,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.150420656698515,0.40341013740704,2.34454203369928,0.261906694481422,0,0.147856086217045,0.135075169236789,0,0,0,0,3.28954660114309,0,0.351742488719241,0.127762427639595,0,0,0.606965604236632,0.227662191351298,0,0.576169937778896,0.171488009437418,0.271878931907327,0.263091094251396,0.118193840883968,0.111231401892069,0,0,0,0,0.431855182437243,0,0.0714765441766563,0.316027223465453,0.464965701472501,0,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0,0,0.955538938977433,0,0.294450700845729,0.243835849964539,0,0,0,0,4.44484980578001,0.198950775161368,0.356760272332706,0,0.219881033490858,6.34043942980029,0.154348316215889,0,20.693961039907,0,5.65623713043902,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0.199882311849858,0,0,0.160482733378337,0,0,0.716697915757256,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0.305966489225945,0,0.0918948995348449,0.250707539292375,0,0.267964130156178,0.829169439458779,0.103432995861895,0.213233981900981,0.23806443146374,0.129177819672012,0,0.33639558774184,0.25458863311266,0.404234377916439,0,0,0.134704106029175,0,0.665320713092027,0,0.213454691755431,0,0.449126010532934,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.893922188854576,0.872338524100369,2.53299878168311,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0.286235987131057,0.684372125364421,0.251085279189606,0.0764134057479513,0.410502947249729,0.236132343941038,0,0,0,0,0,0.739508020333575,0.154934401160603,0.426507697462265,0,0.553995408531877,0,0,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0.852449501065388,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0.628975936525128,0.336985893439485,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,1.90810750907073,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0,0.443067789167242,0.270803863765016,0.768547918354051,1.1705341280389,0.493313713811028,0.552700035571697,0,0.14828656316206,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0.476981248610684,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0.560677600142307,0,0.24666754841716,0,0.538842688278752,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0.280901613404497,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0.340296549480063,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0.928735856063958,0,0.354920400119532,0.337169380156203,0.241011029883482,0.441175890929576,0.871517776369625,0.237270619111097,0.539325232640658,0.784885860501384,0,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0.441463099414651,0,0.171567810298526,0,0,0.502644862058154,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.570762456703795,0,0,0.492434012174795,0,0.594524649154913,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0,0,0.380987365753014,0,0,0,0.411309970813294,0,0,0,0,0.07333828582095,0.517086863031111,0,0.845302752556,0.26593811658487,0,0,0,0.799266537048298,0,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0.199945982364114,2.43247561282381,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.672510863961164,0.394061520403854,0.431255149719035,0,0,0,3.09315525111078,0.167516265334349,1.27587750330633,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,2.0694614258501,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0,0.229628896329213,0.546273504020151,0,0,0.15403067420883,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.309123034943167,0.54941678891006,0.495056999523528,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.307007349452259,0.551346289938122,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0.384380134730212,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.54907405947211,0,0,0,0.421258456238981,0.48763373908959,0,1.05650146756755,0,0.282810863907425,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0,0,0,0.196498082026242,0,0,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0.490080431962063,1.30062222588003,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0.684704037099577,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.485442086998054,0.66866030566487,1.13654458722565,0,0,0,0,0.140669416410513,0.333926115068718,0.16480387422676,0.211125408127993,0.19924798825107,0,2.77126022639704,0.102268682502155,0.123084805461069,0,0,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0.341380344856499,0,0.236387681767936,0.689486746482929,2.91604613383254,0.347249989866585,0,0.361789315876224,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0,0.0769502585037971,0.227884111694002,0.23056390438806,0,0,0,0.183195186803725,0,2.04386596391473,0,0.166211681900156,0,0,0,0,0,0.843992258112108,0.163232808159148,0,0.216388639742091,0,0.265372693510018,0.611030144933625,0.593042257361244,0.741383633679017,1.56632924258183,0.067401132980677,0,1.40558667435203,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0.61214552326098,0.126373159256976,0.150323419414493,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0.51595809741485,0.290268993867255,0.146178634172371,0.246346371159628,0,0,0.677942222341597,0.137041924646751,0.397429223405979,0.316553979779393,0,0.160317640503067,0.213452994739353,0.39961921916426,0,0,1.54435498075768,0.288109595976299,0.124252535565433,0,0,0.209205692624666,0,0,0.600420288709789,0.273810757783986,0,0,1.31443677139657,0,0,0,0.399358000997982,0,0,0,0,0,0.393915911536118,0.412079291905832,0.471824806979294,0.295282444544246,0.423366660328922,0,0.136203406111576,0.321506296930038,0.275078873194468,1.24632101408756,0.449947783103001,0,0.0607495566580247,1.0063040627978,0.157611414598396,0.0524545881349981,0.211200673038813,0.537862017998534,0.191915197319445,0,0,0,1.08599920350743,2.5926644736038,1.30634944043764,0,0.164185041498678,0.340776043570843,0.113312091520126,0.293104467356165,0,0.129282956361551,1.3223260174269,0.513260513652988,0,0,0,0,0.992332043623902,4.34745590175477,0.974340787047167,0,0,0,0.306345576763462,0,0,0.886068179966986,0,0,0,0.221858103073705,0.372578417648301,0,0.37494122388632,0.454947352624943,0,0.941063278792687,1.87333962322753,0.869526171664951,0.447764408660622,0,0,0.189403005275089,0,0,1.14420034198462,0,0,0.147855149989634,0.318593534327405,0.449803112163605,0.310525913752519,0,0.797525143673985,0,0,0,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0,0,0,0.214441591374926,0,0.453411851024545,0,0,0,0.308801447160972,0,0,0.578742114812744,0,0,0.690860683462397,0,0,0,0.132864840313363,0,0.327609848846413,0,0.422624246717254,2.19986135440423,0.213383459388282,0.861074898304078,0,0,0.559518030877778,0,0,0.107824811396682,6.91970144165944,0,1.01839517972415,0.212574920101683,0.495743057036009,0,0,0,1.60114149657094,0.352675943690684,0.6124909547064,0.513833800771676,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.150420656698515,0.40341013740704,2.34454203369928,0.261906694481422,0,0.147856086217045,0.135075169236789,0,0,0,0,3.28954660114309,0,0.351742488719241,0.127762427639595,0,0,0.606965604236632,0.227662191351298,0,0.576169937778896,0.171488009437418,0.271878931907327,0.263091094251396,0.118193840883968,0.111231401892069,0,0,0,0,0.431855182437243,0,0.0714765441766563,0.316027223465453,0.464965701472501,0,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0,0,0.955538938977433,0,0.294450700845729,0.243835849964539,0,0,0,0,4.44484980578001,0.198950775161368,0.356760272332706,0,0.219881033490858,6.34043942980029,0.154348316215889,0,20.693961039907,0,5.65623713043902,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0.199882311849858,0,0,0.160482733378337,0,0,0.716697915757256,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0.305966489225945,0,0.0918948995348449,0.250707539292375,0,0.267964130156178,0.829169439458779,0.103432995861895,0.213233981900981,0.23806443146374,0.129177819672012,0,0.33639558774184,0.25458863311266,0.404234377916439,0,0,0.134704106029175,0,0.665320713092027,0,0.213454691755431,0,0.449126010532934,0,0,0,0,0,0 | ||
|short_description=p@chr18:56822974..56823004,- | |short_description=p@chr18:56822974..56823004,- | ||
}} | }} |
Latest revision as of 01:39, 26 July 2015
Short description: | p@chr18:56822974..56823004, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:56822974..56823004, - |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.01e-07 | 6 |
neuroblast | 1.01e-07 | 6 |
electrically signaling cell | 1.01e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.60e-15 | 3 |
leiomyoma | 7.60e-15 | 3 |
benign neoplasm | 2.91e-11 | 4 |