FFCP PHASE1:Hg19::chr19:23732465..23732505,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:23732465..23732505,+ | |||
|description=CAGE_peak_at_chr19:23732465..23732505,+ | |description=CAGE_peak_at_chr19:23732465..23732505,+ | ||
|id=chr19:23732465..23732505,+ | |id=chr19:23732465..23732505,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.40e-22!254;CL:0002149!1.02e-12!6;CL:0002255!1.02e-12!6;CL:0002076!7.29e-08!43;CL:0000077!1.10e-07!19;CL:0002327!1.32e-07!4;CL:0000076!2.23e-07!62;CL:0002541!7.03e-07!3 | |ontology_enrichment_celltype=CL:0000066!5.40e-22!254;CL:0002149!1.02e-12!6;CL:0002255!1.02e-12!6;CL:0002076!7.29e-08!43;CL:0000077!1.10e-07!19;CL:0002327!1.32e-07!4;CL:0000076!2.23e-07!62;CL:0002541!7.03e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002149;2.58e-19;6!CL:0002255;2.58e-19;6!CL:0000077;5.35e-17;19!CL:0002097;2.53e-15;2!CL:0000174;1.62e-10;3!CL:0000076;4.56e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.36e-19,6;CL:0002255,2.36e-19,6;CL:0000077,6.45e-17,19;CL:0002097,2.92e-15,2;CL:0000076,1.34e-13,63;CL:0000174,1.78e-10,3;CL:0000066,4.45e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.06e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.07e-24!143;DOID:305!2.78e-23!106;DOID:14566!2.81e-20!239;DOID:162!2.95e-19!235;DOID:3001!1.02e-12!6;DOID:1749!1.35e-08!14 | |ontology_enrichment_disease=DOID:0050687!5.07e-24!143;DOID:305!2.78e-23!106;DOID:14566!2.81e-20!239;DOID:162!2.95e-19!235;DOID:3001!1.02e-12!6;DOID:1749!1.35e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3001;2.58e-19;6!DOID:1749;1.90e-12;14!DOID:170;3.25e-11;6!DOID:6193;5.06e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.36e-19,6;DOID:0050687,1.31e-15,143;DOID:162,2.59e-15,235;DOID:14566,6.73e-15,239;DOID:305,8.93e-14,106;DOID:1749,2.04e-12,14;DOID:170,3.61e-11,6;DOID:6193,5.43e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.97e-17!9;UBERON:0005631!3.55e-10!14;UBERON:0000158!3.55e-10!14;UBERON:0000995!9.31e-10!21;UBERON:0005795!3.41e-09!22;UBERON:0003975!3.41e-09!22;UBERON:0001557!1.28e-08!19;UBERON:0003100!1.58e-08!41;UBERON:0004175!8.81e-08!25;UBERON:0001911!1.32e-07!4;UBERON:0005333!1.32e-07!4;UBERON:0008425!1.32e-07!4;UBERON:0005311!1.32e-07!4;UBERON:0003124!3.95e-07!7;UBERON:0000476!7.03e-07!3;UBERON:0000920!7.03e-07!3 | |ontology_enrichment_uberon=UBERON:0001737!4.97e-17!9;UBERON:0005631!3.55e-10!14;UBERON:0000158!3.55e-10!14;UBERON:0000995!9.31e-10!21;UBERON:0005795!3.41e-09!22;UBERON:0003975!3.41e-09!22;UBERON:0001557!1.28e-08!19;UBERON:0003100!1.58e-08!41;UBERON:0004175!8.81e-08!25;UBERON:0001911!1.32e-07!4;UBERON:0005333!1.32e-07!4;UBERON:0008425!1.32e-07!4;UBERON:0005311!1.32e-07!4;UBERON:0003124!3.95e-07!7;UBERON:0000476!7.03e-07!3;UBERON:0000920!7.03e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.62e-10;3!UBERON:0001235;1.62e-10;3!UBERON:0006858;1.62e-10;3!UBERON:0000995;2.32e-10;17!UBERON:0003975;9.00e-10;18!UBERON:0001282;1.95e-08;1!UBERON:0009842;1.95e-08;1!UBERON:0003704;1.95e-08;1!UBERON:0001171;1.95e-08;1!UBERON:0001172;1.95e-08;1!UBERON:0004175;2.42e-08;21!UBERON:0007195;2.69e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.78e-10,3;UBERON:0001235,1.78e-10,3;UBERON:0006858,1.78e-10,3;UBERON:0001282,1.88e-08,1;UBERON:0009842,1.88e-08,1;UBERON:0003704,1.88e-08,1;UBERON:0001171,1.88e-08,1;UBERON:0001172,1.88e-08,1;UBERON:0000995,2.35e-08,21;UBERON:0007195,2.50e-08,1;UBERON:0005795,5.78e-08,22;UBERON:0003975,5.78e-08,22;UBERON:0004175,5.61e-07,25 | |||
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| ||
|short_description=p@chr19:23732465..23732505,+ | |short_description=p@chr19:23732465..23732505,+ | ||
}} | }} |
Latest revision as of 05:51, 26 July 2015
Short description: | p@chr19:23732465..23732505, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:23732465..23732505, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.36e-19 | 6 |
stromal cell of endometrium | 2.36e-19 | 6 |
mesothelial cell | 6.45e-17 | 19 |
cortical cell of adrenal gland | 2.92e-15 | 2 |
squamous epithelial cell | 1.34e-13 | 63 |
steroid hormone secreting cell | 1.78e-10 | 3 |
epithelial cell | 4.45e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.78e-10 | 3 |
adrenal cortex | 1.78e-10 | 3 |
adrenal/interrenal gland | 1.78e-10 | 3 |
intralobular bile duct | 1.88e-08 | 1 |
acinus | 1.88e-08 | 1 |
intrahepatic bile duct | 1.88e-08 | 1 |
portal lobule | 1.88e-08 | 1 |
hepatic acinus | 1.88e-08 | 1 |
uterus | 2.35e-08 | 21 |
stroma of bone marrow | 2.50e-08 | 1 |
embryonic uterus | 5.78e-08 | 22 |
internal female genitalia | 5.78e-08 | 22 |
internal genitalia | 5.61e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.36e-19 | 6 |
cell type cancer | 1.31e-15 | 143 |
cancer | 2.59e-15 | 235 |
disease of cellular proliferation | 6.73e-15 | 239 |
carcinoma | 8.93e-14 | 106 |
squamous cell carcinoma | 2.04e-12 | 14 |
endocrine gland cancer | 3.61e-11 | 6 |
epithelioid sarcoma | 5.43e-08 | 1 |