FFCP PHASE1:Hg19::chr19:282788..282832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:282788..282832,- | |||
|coexpression_cluster_id=C196 | |coexpression_cluster_id=C196 | ||
|description=CAGE_peak_at_chr19:282788..282832,- | |description=CAGE_peak_at_chr19:282788..282832,- | ||
|id=chr19:282788..282832,- | |id=chr19:282788..282832,- | ||
|ontology_enrichment_celltype=CL:0000039;1.49e-38;7!CL:0000586;1.49e-38;7!CL:0000244;1.03e-17;4!CL:0000731;1.03e-17;4 | |ontology_enrichment_celltype=CL:0000066!3.70e-11!254;CL:0002322!1.97e-09!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;1.49e-38;7!CL:0000586;1.49e-38;7!CL:0000244;1.03e-17;4!CL:0000731;1.03e-17;4 | ||
|ontology_enrichment_disease=DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22 | |ontology_enrichment_celltype_v019_2=CL:0000039,1.49e-38,7;CL:0000586,1.49e-38,7;CL:0000244,1.03e-17,4;CL:0000731,1.03e-17,4 | ||
|ontology_enrichment_uberon=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000365;1.83e-14;5!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0005910;2.74e-12;6!UBERON:0003133;9.62e-08;44!UBERON:0000486;8.38e-07;12 | |ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | ||
|ontology_enrichment_disease=DOID:305!4.40e-16!106;DOID:0050687!1.95e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.95e-10!72;UBERON:0004119!5.36e-10!169;UBERON:0000925!5.36e-10!169;UBERON:0006595!5.36e-10!169;UBERON:0001007!1.77e-09!155;UBERON:0001555!1.77e-09!155;UBERON:0007026!1.77e-09!155;UBERON:0008947!4.92e-08!38;UBERON:0003258!4.92e-08!38;UBERON:0001041!5.24e-08!98;UBERON:0000077!5.89e-08!130;UBERON:0000072!9.03e-08!46;UBERON:0004921!3.07e-07!129;UBERON:0004185!3.07e-07!129;UBERON:0000065!3.09e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000365;1.83e-14;5!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0005910;2.74e-12;6!UBERON:0003133;9.62e-08;44!UBERON:0000486;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000365,1.83e-14,5;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0005910,2.74e-12,6;UBERON:0002323,7.30e-07,46 | |||
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| ||
|short_description=p@chr19:282788..282832,- | |short_description=p@chr19:282788..282832,- | ||
}} | }} |
Latest revision as of 05:59, 26 July 2015
Short description: | p@chr19:282788..282832, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:282788..282832, - |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.49e-38 | 7 |
germ cell | 1.49e-38 | 7 |
transitional epithelial cell | 1.03e-17 | 4 |
urothelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
urothelium | 1.83e-14 | 5 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
transitional epithelium | 2.74e-12 | 6 |
body cavity | 7.30e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |