FFCP PHASE1:Hg19::chr19:36592910..36592917,+: Difference between revisions
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|id=chr19:36592910..36592917,+
|short_description=p@chr19:36592910..36592917,+
|description=CAGE_peak_at_chr19:36592910..36592917,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:36592910..36592917,+ | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr19:36592910..36592917,+ | |||
|id=chr19:36592910..36592917,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.04e-25!3;CL:0002577!1.04e-25!3;CL:0002536!1.37e-17!2;CL:0002537!1.45e-15!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.74e-73;19!CL:0002577;8.78e-67;3!CL:0002536;1.71e-44;2!CL:0002537;4.35e-40;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.74e-73,19;CL:0002577,1.23e-66,3;CL:0002536,1.22e-44,2;CL:0002537,4.35e-40,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:9119!2.16e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.72e-57!14;UBERON:0000158!3.72e-57!14;UBERON:0001987!2.35e-33!4;UBERON:0004340!2.35e-33!4;UBERON:0000478!1.02e-32!24;UBERON:0000305!1.71e-29!7;UBERON:0003124!3.05e-29!7;UBERON:0004871!8.41e-26!8;UBERON:0004923!7.46e-13!57;UBERON:0000995!1.24e-09!21;UBERON:0005795!3.47e-09!22;UBERON:0003975!3.47e-09!22;UBERON:0002902!4.87e-09!1;UBERON:0009899!4.87e-09!1;UBERON:0000064!1.22e-08!219;UBERON:0004175!4.65e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;6.56e-78;7!UBERON:0000478;3.25e-58;24!UBERON:0005631;1.05e-54;10!UBERON:0000158;1.05e-54;10!UBERON:0001987;2.43e-50;4!UBERON:0000077;4.48e-08;27!UBERON:0004923;2.45e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.22e-99,14;UBERON:0000158,1.22e-99,14;UBERON:0000305,5.17e-78,7;UBERON:0004871,2.46e-68,8;UBERON:0000478,3.25e-58,24;UBERON:0001987,3.12e-50,4;UBERON:0004340,3.12e-50,4;UBERON:0003124,4.23e-29,7;UBERON:0004923,3.48e-21,66;UBERON:0000995,3.46e-10,21;UBERON:0005795,9.40e-10,22;UBERON:0003975,9.40e-10,22;UBERON:0004175,1.17e-08,25;UBERON:0000077,1.52e-07,29 | |||
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|short_description=p@chr19:36592910..36592917,+ | |||
}} | }} |
Latest revision as of 07:00, 26 July 2015
Short description: | p@chr19:36592910..36592917, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36592910..36592917, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.74e-73 | 19 |
placental epithelial cell | 1.23e-66 | 3 |
amniotic epithelial cell | 1.22e-44 | 2 |
amnion mesenchymal stem cell | 4.35e-40 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.22e-99 | 14 |
membranous layer | 1.22e-99 | 14 |
amnion | 5.17e-78 | 7 |
somatic layer of lateral plate mesoderm | 2.46e-68 | 8 |
extraembryonic structure | 3.25e-58 | 24 |
placenta | 3.12e-50 | 4 |
allantois | 3.12e-50 | 4 |
chorion | 4.23e-29 | 7 |
organ component layer | 3.48e-21 | 66 |
uterus | 3.46e-10 | 21 |
embryonic uterus | 9.40e-10 | 22 |
internal female genitalia | 9.40e-10 | 22 |
internal genitalia | 1.17e-08 | 25 |
mixed endoderm/mesoderm-derived structure | 1.52e-07 | 29 |