FFCP PHASE1:Hg19::chr19:49545660..49545673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:49545660..49545673,+ | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chr19:49545660..49545673,+ | |||
|id=chr19:49545660..49545673,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.39e-12!254;CL:0000666!1.86e-11!4;CL:0002188!1.86e-11!4;CL:1000449!2.75e-10!16;CL:1000497!4.50e-09!18;CL:0002518!4.50e-09!18;CL:0002681!4.95e-09!13;CL:0002584!4.95e-09!13;CL:0000239!2.72e-07!3;CL:1000615!2.72e-07!3;CL:0002306!2.72e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.86e-07;4!CL:0000731;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.69e-07,4;CL:0000731,1.69e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.67e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:4929;6.43e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,6.43e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!8.75e-11!26;UBERON:0004211!2.75e-10!16;UBERON:0001285!2.75e-10!16;UBERON:0007684!2.75e-10!16;UBERON:0003220!2.75e-10!16;UBERON:0004208!2.75e-10!16;UBERON:0006555!1.21e-09!17;UBERON:0005103!1.21e-09!17;UBERON:0000083!1.21e-09!17;UBERON:0009201!1.21e-09!17;UBERON:0004819!1.21e-09!17;UBERON:0006553!1.21e-09!17;UBERON:0003074!1.21e-09!17;UBERON:0003060!1.21e-09!17;UBERON:0000080!4.50e-09!18;UBERON:0002120!4.50e-09!18;UBERON:0004875!4.50e-09!18;UBERON:0005721!4.50e-09!18;UBERON:0005754!4.50e-09!18;UBERON:0007297!4.50e-09!18;UBERON:0001225!4.95e-09!13;UBERON:0008987!4.95e-09!13;UBERON:0004876!4.21e-08!20;UBERON:0005910!8.83e-08!6;UBERON:0003887!1.10e-07!21;UBERON:0006554!2.69e-07!44;UBERON:0006853!2.72e-07!3;UBERON:0007685!2.72e-07!3;UBERON:0004134!2.72e-07!3;UBERON:0001851!2.79e-07!16;UBERON:0001008!4.23e-07!45;UBERON:0003064!4.89e-07!37;UBERON:0002294!5.11e-07!7;UBERON:0001173!5.11e-07!7;UBERON:0004912!5.11e-07!7;UBERON:0000353!7.79e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.16e-26;1!UBERON:0003703;2.16e-26;1!UBERON:0001174;2.16e-26;1!UBERON:0004914;2.16e-26;1!UBERON:0002394;6.32e-26;4!UBERON:0003928;6.32e-26;4!UBERON:0002294;2.75e-15;7!UBERON:0001173;2.75e-15;7!UBERON:0000058;5.28e-11;10!UBERON:0002114;1.01e-09;2!UBERON:0003343;1.54e-07;4!UBERON:0004785;1.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.16e-26,1;UBERON:0003703,2.16e-26,1;UBERON:0001174,2.16e-26,1;UBERON:0004914,2.16e-26,1;UBERON:0002394,1.22e-17,6;UBERON:0003928,1.22e-17,6;UBERON:0000058,1.77e-12,19;UBERON:0002294,4.18e-12,9;UBERON:0001173,4.18e-12,9;UBERON:0004912,4.18e-12,9;UBERON:0002114,1.01e-09,2;UBERON:0003343,1.49e-07,4;UBERON:0004785,1.49e-07,4 | |||
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|short_description=p@chr19:49545660..49545673,+ | |||
}} | }} |
Latest revision as of 15:59, 27 July 2015
Short description: | p@chr19:49545660..49545673, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49545660..49545673, + |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.69e-07 | 4 |
urothelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.16e-26 | 1 |
extrahepatic bile duct | 2.16e-26 | 1 |
common bile duct | 2.16e-26 | 1 |
duodenal papilla | 2.16e-26 | 1 |
bile duct | 1.22e-17 | 6 |
digestive system duct | 1.22e-17 | 6 |
duct | 1.77e-12 | 19 |
biliary system | 4.18e-12 | 9 |
biliary tree | 4.18e-12 | 9 |
biliary bud | 4.18e-12 | 9 |
duodenum | 1.01e-09 | 2 |
mucosa of oral region | 1.49e-07 | 4 |
respiratory system mucosa | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 6.43e-14 | 2 |