FFCP PHASE1:Hg19::chr19:51521418..51521421,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:51521418..51521421,- | |||
|description=CAGE_peak_at_chr19:51521418..51521421,- | |||
|id=chr19:51521418..51521421,- | |||
|ontology_enrichment_celltype=CL:0002251!1.79e-14!21;CL:0002076!4.08e-13!43;CL:0000223!1.64e-08!59;CL:0000066!9.71e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.34e-11;2!CL:0002097;3.34e-11;2!CL:0000150;7.91e-10;9!CL:0002623;5.01e-08;3!CL:0000174;6.78e-08;3!CL:0002231;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.02e-11,2;CL:0000150,7.74e-10,9;CL:0002623,5.18e-08,3;CL:0000174,6.34e-08,3;CL:0002231,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.16e-21;1 | |||
|ontology_enrichment_disease=DOID:1749!5.10e-12!14;DOID:299!7.68e-08!25;DOID:305!2.07e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.07e-14!21;UBERON:0003343!5.29e-12!4;UBERON:0004785!5.29e-12!4;UBERON:0000161!3.27e-11!35;UBERON:0000165!2.13e-10!28;UBERON:0000930!2.13e-10!28;UBERON:0002294!4.98e-10!7;UBERON:0001173!4.98e-10!7;UBERON:0004912!4.98e-10!7;UBERON:0001723!1.27e-09!3;UBERON:0001033!1.27e-09!3;UBERON:0010056!1.27e-09!3;UBERON:0003729!1.34e-09!5;UBERON:0002110!6.96e-09!3;UBERON:0006242!6.96e-09!3;UBERON:0000344!2.69e-08!12;UBERON:0000974!3.85e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.53e-21;1!UBERON:0003703;1.53e-21;1!UBERON:0001174;1.53e-21;1!UBERON:0004914;1.53e-21;1!UBERON:0000997;5.16e-21;1!UBERON:0005056;5.16e-21;1!UBERON:0004176;5.16e-21;1!UBERON:0002114;4.52e-08;2!UBERON:0001043;6.78e-08;3!UBERON:0002369;6.78e-08;3!UBERON:0001235;6.78e-08;3!UBERON:0006858;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.53e-21,1;UBERON:0003703,1.53e-21,1;UBERON:0001174,1.53e-21,1;UBERON:0004914,1.53e-21,1;UBERON:0000997,2.82e-21,1;UBERON:0005056,2.82e-21,1;UBERON:0002114,4.52e-08,2;UBERON:0002369,6.34e-08,3;UBERON:0001235,6.34e-08,3;UBERON:0006858,6.34e-08,3;UBERON:0001043,7.26e-08,3;UBERON:0009143,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,1.01289087829486,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37020365273626,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95984794828755,0.0870592065804026,0,0,0,0,0,1.26085721434945,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0.640358984218058,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0.235939446695481,0.917142992608395,0.462102664601353,0,0,0,0.150420656698515,0,0,0,0,3.69640215542613,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,2.07377898544228,0,0,0,0,0.9164274741762,0,0,0.111855431797792,0.098150233615243,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0,0,0,0,0,0.653150243690884,0.342233301085281,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:51521418..51521421,- | |||
}} |
Latest revision as of 16:36, 27 July 2015
Short description: | p@chr19:51521418..51521421, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51521418..51521421, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.02e-11 | 2 |
glandular epithelial cell | 7.74e-10 | 9 |
acinar cell of salivary gland | 5.18e-08 | 3 |
steroid hormone secreting cell | 6.34e-08 | 3 |
epithelial cell of prostate | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.53e-21 | 1 |
extrahepatic bile duct | 1.53e-21 | 1 |
common bile duct | 1.53e-21 | 1 |
duodenal papilla | 1.53e-21 | 1 |
mammalian vulva | 2.82e-21 | 1 |
external female genitalia | 2.82e-21 | 1 |
duodenum | 4.52e-08 | 2 |
adrenal gland | 6.34e-08 | 3 |
adrenal cortex | 6.34e-08 | 3 |
adrenal/interrenal gland | 6.34e-08 | 3 |
esophagus | 7.26e-08 | 3 |
esophageal region | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.82e-11 | 2 |